Gene : Sobic.001G011600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR36716:SF2 - F3H9.20 PROTEIN Genomic Order:  115
Name:  ? Sobic.001G011600 Secondary Identifier:  ? PAC:37943558
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G011600 0.5kb upstream 0.5kb upstream 2927 true Chr01: 1003621-1006547 Sorghum bicolor
Sobic.001G011600 0.5kb upstream 0.5kb upstream 500 false Chr01: 1003621-1004120 Sorghum bicolor
Sobic.001G011600 0.5kb downstream 0.5kb downstream 2927 true Chr01: 1004121-1007047 Sorghum bicolor
Sobic.001G011600 0.5kb downstream 0.5kb downstream 500 false Chr01: 1006548-1007047 Sorghum bicolor
Sobic.001G011600 1.0kb upstream 1.0kb upstream 3427 true Chr01: 1003121-1006547 Sorghum bicolor
Sobic.001G011600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1003121-1004120 Sorghum bicolor
Sobic.001G011600 1.0kb downstream 1.0kb downstream 3427 true Chr01: 1004121-1007547 Sorghum bicolor
Sobic.001G011600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1006548-1007547 Sorghum bicolor
Sobic.001G011600 2.0kb upstream 2.0kb upstream 4427 true Chr01: 1002121-1006547 Sorghum bicolor
Sobic.001G011600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1002121-1004120 Sorghum bicolor
Sobic.001G011600 2.0kb downstream 2.0kb downstream 4427 true Chr01: 1004121-1008547 Sorghum bicolor
Sobic.001G011600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1006548-1008547 Sorghum bicolor
Sobic.001G011600 5.0kb upstream 5.0kb upstream 7427 true Chr01: 999121-1006547 Sorghum bicolor
Sobic.001G011600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 999121-1004120 Sorghum bicolor
Sobic.001G011600 5.0kb downstream 5.0kb downstream 7427 true Chr01: 1004121-1011547 Sorghum bicolor
Sobic.001G011600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1006548-1011547 Sorghum bicolor
Sobic.001G011600 10.0kb upstream 10.0kb upstream 12427 true Chr01: 994121-1006547 Sorghum bicolor
Sobic.001G011600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 994121-1004120 Sorghum bicolor
Sobic.001G011600 10.0kb downstream 10.0kb downstream 12427 true Chr01: 1004121-1016547 Sorghum bicolor
Sobic.001G011600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1006548-1016547 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189517 5267 Panicoideae View MSA
124577235 5269 Grass View MSA
122042294 5273 Angiosperm View MSA
121344555 5274 Embryophyte View MSA
123424040 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.818        
cufflinks 2.623        
cufflinks 0.787        
cufflinks 1.01        
cufflinks 0.593        
cufflinks 0.844        
cufflinks 3.367       High
cufflinks 5.757       High
cufflinks 0.648        
cufflinks 0.675        
cufflinks 0.09       Low
cufflinks 0.185        
cufflinks 0.191        
cufflinks 0.23        
cufflinks 0.891        
cufflinks 1.829        
cufflinks 4.169       High
cufflinks 4.52       High
cufflinks 0.667        
cufflinks 3.554       High
cufflinks 0.8        
cufflinks 0.1     Low Low
cufflinks 0.123       Low
cufflinks 0.148       Low
cufflinks 1.092        
cufflinks 2.974       High
cufflinks 0.046     Low Low
cufflinks 3.367       High
cufflinks 10.591       High
cufflinks 1.105        

0 Strain