Gene : Sobic.001G010400 S. bicolor v3.1.1
Defline:  similar to SnRK1-interacting protein 1, putative, expressed Genomic Order:  104
Name:  ? Sobic.001G010400 Secondary Identifier:  ? PAC:37944098
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G010400 0.5kb upstream 0.5kb upstream 2785 true Chr01: 925774-928558 Sorghum bicolor
Sobic.001G010400 0.5kb upstream 0.5kb upstream 500 false Chr01: 928059-928558 Sorghum bicolor
Sobic.001G010400 0.5kb downstream 0.5kb downstream 2785 true Chr01: 925274-928058 Sorghum bicolor
Sobic.001G010400 0.5kb downstream 0.5kb downstream 500 false Chr01: 925274-925773 Sorghum bicolor
Sobic.001G010400 1.0kb upstream 1.0kb upstream 3285 true Chr01: 925774-929058 Sorghum bicolor
Sobic.001G010400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 928059-929058 Sorghum bicolor
Sobic.001G010400 1.0kb downstream 1.0kb downstream 3285 true Chr01: 924774-928058 Sorghum bicolor
Sobic.001G010400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 924774-925773 Sorghum bicolor
Sobic.001G010400 2.0kb upstream 2.0kb upstream 4285 true Chr01: 925774-930058 Sorghum bicolor
Sobic.001G010400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 928059-930058 Sorghum bicolor
Sobic.001G010400 2.0kb downstream 2.0kb downstream 4285 true Chr01: 923774-928058 Sorghum bicolor
Sobic.001G010400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 923774-925773 Sorghum bicolor
Sobic.001G010400 5.0kb upstream 5.0kb upstream 7285 true Chr01: 925774-933058 Sorghum bicolor
Sobic.001G010400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 928059-933058 Sorghum bicolor
Sobic.001G010400 5.0kb downstream 5.0kb downstream 7285 true Chr01: 920774-928058 Sorghum bicolor
Sobic.001G010400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 920774-925773 Sorghum bicolor
Sobic.001G010400 10.0kb upstream 10.0kb upstream 12285 true Chr01: 925774-938058 Sorghum bicolor
Sobic.001G010400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 928059-938058 Sorghum bicolor
Sobic.001G010400 10.0kb downstream 10.0kb downstream 12285 true Chr01: 915774-928058 Sorghum bicolor
Sobic.001G010400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 915774-925773 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185147 5267 Panicoideae View MSA
124580313 5269 Grass View MSA
122043827 5273 Angiosperm View MSA
121348522 5274 Embryophyte View MSA
123380896 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.027     High High
cufflinks 1.252       Low
cufflinks 4.578       Low
cufflinks 17.73     High  
cufflinks 10.376        
cufflinks 16.675     High  
cufflinks 7.894        
cufflinks 6.201        
cufflinks 16.232     High  
cufflinks 13.715     High  
cufflinks 14.367     High  
cufflinks 14.123     High  
cufflinks 15.254     High  
cufflinks 16.298     High  
cufflinks 9.035        
cufflinks 4.325       Low
cufflinks 8.291        
cufflinks 8.648        
cufflinks 5.843        
cufflinks 12.485     High  
cufflinks 7.964        
cufflinks 13.949     High  
cufflinks 13.703     High  
cufflinks 13.869     High  
cufflinks 1.481       Low
cufflinks 1.309       Low
cufflinks 11.917     High  
cufflinks 63.636     High High
cufflinks 14.518     High  
cufflinks 10.685        

0 Strain