Gene : Sobic.003G385500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11771//PTHR11771:SF54 - LIPOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  4054
Name:  ? Sobic.003G385500 Secondary Identifier:  ? PAC:37915010
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G385500 0.5kb upstream 0.5kb upstream 4316 true Chr03: 69796879-69801194 Sorghum bicolor
Sobic.003G385500 0.5kb upstream 0.5kb upstream 500 false Chr03: 69800695-69801194 Sorghum bicolor
Sobic.003G385500 0.5kb downstream 0.5kb downstream 4316 true Chr03: 69796379-69800694 Sorghum bicolor
Sobic.003G385500 0.5kb downstream 0.5kb downstream 500 false Chr03: 69796379-69796878 Sorghum bicolor
Sobic.003G385500 1.0kb upstream 1.0kb upstream 4816 true Chr03: 69796879-69801694 Sorghum bicolor
Sobic.003G385500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 69800695-69801694 Sorghum bicolor
Sobic.003G385500 1.0kb downstream 1.0kb downstream 4816 true Chr03: 69795879-69800694 Sorghum bicolor
Sobic.003G385500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 69795879-69796878 Sorghum bicolor
Sobic.003G385500 2.0kb upstream 2.0kb upstream 5816 true Chr03: 69796879-69802694 Sorghum bicolor
Sobic.003G385500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 69800695-69802694 Sorghum bicolor
Sobic.003G385500 2.0kb downstream 2.0kb downstream 5816 true Chr03: 69794879-69800694 Sorghum bicolor
Sobic.003G385500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 69794879-69796878 Sorghum bicolor
Sobic.003G385500 5.0kb upstream 5.0kb upstream 8816 true Chr03: 69796879-69805694 Sorghum bicolor
Sobic.003G385500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 69800695-69805694 Sorghum bicolor
Sobic.003G385500 5.0kb downstream 5.0kb downstream 8816 true Chr03: 69791879-69800694 Sorghum bicolor
Sobic.003G385500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 69791879-69796878 Sorghum bicolor
Sobic.003G385500 10.0kb upstream 10.0kb upstream 13816 true Chr03: 69796879-69810694 Sorghum bicolor
Sobic.003G385500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 69800695-69810694 Sorghum bicolor
Sobic.003G385500 10.0kb downstream 10.0kb downstream 13816 true Chr03: 69786879-69800694 Sorghum bicolor
Sobic.003G385500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 69786879-69796878 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191001 5267 Panicoideae View MSA
124585684 5269 Grass View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.347       Low
cufflinks 1.442       Low
cufflinks 62.375     High  
cufflinks 1.89       Low
cufflinks 2231.562     High High
cufflinks 3.062        
cufflinks 85.737     High  
cufflinks 3.873        
cufflinks 14.289     High  
cufflinks 17.573     High  
cufflinks 38.01     High  
cufflinks 8.496        
cufflinks 77.698     High  
cufflinks 36.841     High  
cufflinks 12.767     High  
cufflinks 179.301     High  
cufflinks 33.875     High  
cufflinks 45.075     High  
cufflinks 340.609     High High
cufflinks 21.656     High  
cufflinks 12.655        
cufflinks 54.144     High  
cufflinks 19.324     High  
cufflinks 20.307     High  
cufflinks 0.295       Low
cufflinks 0.834       Low
cufflinks 48.225     High  
cufflinks 0.022     Low Low
cufflinks 88.004     High  
cufflinks 12.278     High  

0 Strain