Gene : Sobic.001G005700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR20863//PTHR20863:SF34 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED // SUBFAMILY NOT NAMED Genomic Order:  57
Name:  ? Sobic.001G005700 Secondary Identifier:  ? PAC:37939556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G005700 0.5kb upstream 0.5kb upstream 2642 true Chr01: 541462-544103 Sorghum bicolor
Sobic.001G005700 0.5kb upstream 0.5kb upstream 500 false Chr01: 541462-541961 Sorghum bicolor
Sobic.001G005700 0.5kb downstream 0.5kb downstream 2642 true Chr01: 541962-544603 Sorghum bicolor
Sobic.001G005700 0.5kb downstream 0.5kb downstream 500 false Chr01: 544104-544603 Sorghum bicolor
Sobic.001G005700 1.0kb upstream 1.0kb upstream 3142 true Chr01: 540962-544103 Sorghum bicolor
Sobic.001G005700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 540962-541961 Sorghum bicolor
Sobic.001G005700 1.0kb downstream 1.0kb downstream 3142 true Chr01: 541962-545103 Sorghum bicolor
Sobic.001G005700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 544104-545103 Sorghum bicolor
Sobic.001G005700 2.0kb upstream 2.0kb upstream 4142 true Chr01: 539962-544103 Sorghum bicolor
Sobic.001G005700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 539962-541961 Sorghum bicolor
Sobic.001G005700 2.0kb downstream 2.0kb downstream 4142 true Chr01: 541962-546103 Sorghum bicolor
Sobic.001G005700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 544104-546103 Sorghum bicolor
Sobic.001G005700 5.0kb upstream 5.0kb upstream 7142 true Chr01: 536962-544103 Sorghum bicolor
Sobic.001G005700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 536962-541961 Sorghum bicolor
Sobic.001G005700 5.0kb downstream 5.0kb downstream 7142 true Chr01: 541962-549103 Sorghum bicolor
Sobic.001G005700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 544104-549103 Sorghum bicolor
Sobic.001G005700 10.0kb upstream 10.0kb upstream 12142 true Chr01: 531962-544103 Sorghum bicolor
Sobic.001G005700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 531962-541961 Sorghum bicolor
Sobic.001G005700 10.0kb downstream 10.0kb downstream 12142 true Chr01: 541962-554103 Sorghum bicolor
Sobic.001G005700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 544104-554103 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185847 5267 Panicoideae View MSA
124585320 5269 Grass View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.522        
cufflinks 0.122       Low
cufflinks 0.525        
cufflinks 1.077        
cufflinks 1.167        
cufflinks 1.963        
cufflinks 0.621        
cufflinks 0.214       Low
cufflinks 4.419       High
cufflinks 3.272        
cufflinks 1.145        
cufflinks 6.829       High
cufflinks 3.165        
cufflinks 1.377        
cufflinks 1.135        
cufflinks 0.33        
cufflinks 0.746        
cufflinks 0.536        
cufflinks 0.216       Low
cufflinks 0.993        
cufflinks 1.043        
cufflinks 19.181     High High
cufflinks 2.931        
cufflinks 1.402        
cufflinks 0.027     Low Low
cufflinks 0.063       Low
cufflinks 72.712     High High
cufflinks 0.211       Low
cufflinks 0.406        
cufflinks 0.586        

0 Strain