Gene : Sobic.001G000200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22957//PTHR22957:SF273 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2
Name:  ? Sobic.001G000200 Secondary Identifier:  ? PAC:37944019
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G000200 0.5kb upstream 0.5kb upstream 4220 true Chr01: 11180-15399 Sorghum bicolor
Sobic.001G000200 0.5kb upstream 0.5kb upstream 500 false Chr01: 14900-15399 Sorghum bicolor
Sobic.001G000200 0.5kb downstream 0.5kb downstream 4220 true Chr01: 10680-14899 Sorghum bicolor
Sobic.001G000200 0.5kb downstream 0.5kb downstream 500 false Chr01: 10680-11179 Sorghum bicolor
Sobic.001G000200 1.0kb upstream 1.0kb upstream 4720 true Chr01: 11180-15899 Sorghum bicolor
Sobic.001G000200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14900-15899 Sorghum bicolor
Sobic.001G000200 1.0kb downstream 1.0kb downstream 4720 true Chr01: 10180-14899 Sorghum bicolor
Sobic.001G000200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 10180-11179 Sorghum bicolor
Sobic.001G000200 2.0kb upstream 2.0kb upstream 5720 true Chr01: 11180-16899 Sorghum bicolor
Sobic.001G000200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14900-16899 Sorghum bicolor
Sobic.001G000200 2.0kb downstream 2.0kb downstream 5720 true Chr01: 9180-14899 Sorghum bicolor
Sobic.001G000200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9180-11179 Sorghum bicolor
Sobic.001G000200 5.0kb upstream 5.0kb upstream 8720 true Chr01: 11180-19899 Sorghum bicolor
Sobic.001G000200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14900-19899 Sorghum bicolor
Sobic.001G000200 5.0kb downstream 5.0kb downstream 8720 true Chr01: 6180-14899 Sorghum bicolor
Sobic.001G000200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6180-11179 Sorghum bicolor
Sobic.001G000200 10.0kb upstream 10.0kb upstream 13720 true Chr01: 11180-24899 Sorghum bicolor
Sobic.001G000200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14900-24899 Sorghum bicolor
Sobic.001G000200 10.0kb downstream 10.0kb downstream 13720 true Chr01: 1180-14899 Sorghum bicolor
Sobic.001G000200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1180-11179 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188858 5267 Panicoideae View MSA
124572838 5269 Grass View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.86       Low
cufflinks 5.703       Low
cufflinks 8.863        
cufflinks 14.742     High  
cufflinks 10.108        
cufflinks 12.105        
cufflinks 16.116     High  
cufflinks 12.892     High  
cufflinks 18.621     High  
cufflinks 16.751     High  
cufflinks 28.888     High High
cufflinks 24.285     High High
cufflinks 17.464     High  
cufflinks 23.212     High High
cufflinks 12.784     High  
cufflinks 8.801        
cufflinks 17.612     High  
cufflinks 16.707     High  
cufflinks 8.247        
cufflinks 15.374     High  
cufflinks 14.276     High  
cufflinks 23.651     High High
cufflinks 25.109     High High
cufflinks 25.498     High High
cufflinks 9.413     High  
cufflinks 6.701     High Low
cufflinks 19.946     High  
cufflinks 2.356       Low
cufflinks 18.853     High  
cufflinks 14.174     High  

0 Strain