Gene : Sobic.001G001300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22778//PTHR22778:SF18 - OVARIAN CANCER GENE-2 PROTEIN-RELATED // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 8, CHLOROPLASTIC Genomic Order:  13
Name:  ? Sobic.001G001300 Secondary Identifier:  ? PAC:37940174
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G001300 0.5kb upstream 0.5kb upstream 3783 true Chr01: 112266-116048 Sorghum bicolor
Sobic.001G001300 0.5kb upstream 0.5kb upstream 500 false Chr01: 112266-112765 Sorghum bicolor
Sobic.001G001300 0.5kb downstream 0.5kb downstream 3783 true Chr01: 112766-116548 Sorghum bicolor
Sobic.001G001300 0.5kb downstream 0.5kb downstream 500 false Chr01: 116049-116548 Sorghum bicolor
Sobic.001G001300 1.0kb upstream 1.0kb upstream 4283 true Chr01: 111766-116048 Sorghum bicolor
Sobic.001G001300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 111766-112765 Sorghum bicolor
Sobic.001G001300 1.0kb downstream 1.0kb downstream 4283 true Chr01: 112766-117048 Sorghum bicolor
Sobic.001G001300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 116049-117048 Sorghum bicolor
Sobic.001G001300 2.0kb upstream 2.0kb upstream 5283 true Chr01: 110766-116048 Sorghum bicolor
Sobic.001G001300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 110766-112765 Sorghum bicolor
Sobic.001G001300 2.0kb downstream 2.0kb downstream 5283 true Chr01: 112766-118048 Sorghum bicolor
Sobic.001G001300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 116049-118048 Sorghum bicolor
Sobic.001G001300 5.0kb upstream 5.0kb upstream 8283 true Chr01: 107766-116048 Sorghum bicolor
Sobic.001G001300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 107766-112765 Sorghum bicolor
Sobic.001G001300 5.0kb downstream 5.0kb downstream 8283 true Chr01: 112766-121048 Sorghum bicolor
Sobic.001G001300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 116049-121048 Sorghum bicolor
Sobic.001G001300 10.0kb upstream 10.0kb upstream 13283 true Chr01: 102766-116048 Sorghum bicolor
Sobic.001G001300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 102766-112765 Sorghum bicolor
Sobic.001G001300 10.0kb downstream 10.0kb downstream 13283 true Chr01: 112766-126048 Sorghum bicolor
Sobic.001G001300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 116049-126048 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187757 5267 Panicoideae View MSA
124577126 5269 Grass View MSA
122046672 5273 Angiosperm View MSA
121346147 5274 Embryophyte View MSA
123427771 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.212        
cufflinks 8.224     High High
cufflinks 7.159       High
cufflinks 4.858        
cufflinks 1.11        
cufflinks 4.54        
cufflinks 7.699       High
cufflinks 12.594     High High
cufflinks 1.946        
cufflinks 1.574        
cufflinks 0.741        
cufflinks 0.941        
cufflinks 0.943        
cufflinks 0.468       Low
cufflinks 2.431        
cufflinks 6.3       High
cufflinks 6.817       High
cufflinks 8.814       High
cufflinks 5.904        
cufflinks 4.237        
cufflinks 2.312        
cufflinks 0.564       Low
cufflinks 0.659       Low
cufflinks 0.629       Low
cufflinks 4.125        
cufflinks 5.878        
cufflinks 0.674        
cufflinks 1.846        
cufflinks 18.994     High High
cufflinks 2.27        

0 Strain