Gene : Sobic.001G001900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22847//PTHR22847:SF429 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  17
Name:  ? Sobic.001G001900 Secondary Identifier:  ? PAC:37941755
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G001900 0.5kb upstream 0.5kb upstream 7190 true Chr01: 155315-162504 Sorghum bicolor
Sobic.001G001900 0.5kb upstream 0.5kb upstream 500 false Chr01: 162005-162504 Sorghum bicolor
Sobic.001G001900 0.5kb downstream 0.5kb downstream 7190 true Chr01: 154815-162004 Sorghum bicolor
Sobic.001G001900 0.5kb downstream 0.5kb downstream 500 false Chr01: 154815-155314 Sorghum bicolor
Sobic.001G001900 1.0kb upstream 1.0kb upstream 7690 true Chr01: 155315-163004 Sorghum bicolor
Sobic.001G001900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 162005-163004 Sorghum bicolor
Sobic.001G001900 1.0kb downstream 1.0kb downstream 7690 true Chr01: 154315-162004 Sorghum bicolor
Sobic.001G001900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 154315-155314 Sorghum bicolor
Sobic.001G001900 2.0kb upstream 2.0kb upstream 8690 true Chr01: 155315-164004 Sorghum bicolor
Sobic.001G001900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 162005-164004 Sorghum bicolor
Sobic.001G001900 2.0kb downstream 2.0kb downstream 8690 true Chr01: 153315-162004 Sorghum bicolor
Sobic.001G001900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 153315-155314 Sorghum bicolor
Sobic.001G001900 5.0kb upstream 5.0kb upstream 11690 true Chr01: 155315-167004 Sorghum bicolor
Sobic.001G001900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 162005-167004 Sorghum bicolor
Sobic.001G001900 5.0kb downstream 5.0kb downstream 11690 true Chr01: 150315-162004 Sorghum bicolor
Sobic.001G001900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 150315-155314 Sorghum bicolor
Sobic.001G001900 10.0kb upstream 10.0kb upstream 16690 true Chr01: 155315-172004 Sorghum bicolor
Sobic.001G001900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 162005-172004 Sorghum bicolor
Sobic.001G001900 10.0kb downstream 10.0kb downstream 16690 true Chr01: 145315-162004 Sorghum bicolor
Sobic.001G001900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 145315-155314 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191288 5267 Panicoideae View MSA
124580503 5269 Grass View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.065       Low
cufflinks 5.278        
cufflinks 6.815        
cufflinks 8.307        
cufflinks 6.212        
cufflinks 8.683        
cufflinks 6.812        
cufflinks 5.269        
cufflinks 17.039     High High
cufflinks 16.914     High High
cufflinks 7.039        
cufflinks 7.328        
cufflinks 11.409       High
cufflinks 6.06        
cufflinks 8.144        
cufflinks 6.122        
cufflinks 6.861        
cufflinks 5.784        
cufflinks 12.289     High High
cufflinks 6.272        
cufflinks 6.736        
cufflinks 6.52        
cufflinks 6.031        
cufflinks 6.205        
cufflinks 8.495        
cufflinks 6.261        
cufflinks 8.374        
cufflinks 3.63       Low
cufflinks 4.838        
cufflinks 7.832        

0 Strain