Gene : Sobic.003G393800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR34550//PTHR34550:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC Genomic Order:  4142
Name:  ? Sobic.003G393800 Secondary Identifier:  ? PAC:37917083
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G393800 0.5kb upstream 0.5kb upstream 2326 true Chr03: 70483165-70485490 Sorghum bicolor
Sobic.003G393800 0.5kb upstream 0.5kb upstream 500 false Chr03: 70483165-70483664 Sorghum bicolor
Sobic.003G393800 0.5kb downstream 0.5kb downstream 2326 true Chr03: 70483665-70485990 Sorghum bicolor
Sobic.003G393800 0.5kb downstream 0.5kb downstream 500 false Chr03: 70485491-70485990 Sorghum bicolor
Sobic.003G393800 1.0kb upstream 1.0kb upstream 2826 true Chr03: 70482665-70485490 Sorghum bicolor
Sobic.003G393800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 70482665-70483664 Sorghum bicolor
Sobic.003G393800 1.0kb downstream 1.0kb downstream 2826 true Chr03: 70483665-70486490 Sorghum bicolor
Sobic.003G393800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 70485491-70486490 Sorghum bicolor
Sobic.003G393800 2.0kb upstream 2.0kb upstream 3826 true Chr03: 70481665-70485490 Sorghum bicolor
Sobic.003G393800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 70481665-70483664 Sorghum bicolor
Sobic.003G393800 2.0kb downstream 2.0kb downstream 3826 true Chr03: 70483665-70487490 Sorghum bicolor
Sobic.003G393800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 70485491-70487490 Sorghum bicolor
Sobic.003G393800 5.0kb upstream 5.0kb upstream 6826 true Chr03: 70478665-70485490 Sorghum bicolor
Sobic.003G393800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 70478665-70483664 Sorghum bicolor
Sobic.003G393800 5.0kb downstream 5.0kb downstream 6826 true Chr03: 70483665-70490490 Sorghum bicolor
Sobic.003G393800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 70485491-70490490 Sorghum bicolor
Sobic.003G393800 10.0kb upstream 10.0kb upstream 11826 true Chr03: 70473665-70485490 Sorghum bicolor
Sobic.003G393800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 70473665-70483664 Sorghum bicolor
Sobic.003G393800 10.0kb downstream 10.0kb downstream 11826 true Chr03: 70483665-70495490 Sorghum bicolor
Sobic.003G393800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 70485491-70495490 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191469 5267 Panicoideae View MSA
124574896 5269 Grass View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.243        
cufflinks 25.236     High  
cufflinks 35.164     High High
cufflinks 14.434     High  
cufflinks 4.132        
cufflinks 14.104     High  
cufflinks 60.845     High High
cufflinks 60.006     High High
cufflinks 1.83        
cufflinks 1.739        
cufflinks 0.856       Low
cufflinks 0.733       Low
cufflinks 1.682        
cufflinks 0.749       Low
cufflinks 6.335        
cufflinks 33.612     High High
cufflinks 57.41     High High
cufflinks 77.744     High High
cufflinks 32.016     High High
cufflinks 20.641     High  
cufflinks 2.651        
cufflinks 0.913       Low
cufflinks 0.729       Low
cufflinks 0.694       Low
cufflinks 9.077     High  
cufflinks 14.75     High  
cufflinks 0.879       Low
cufflinks 0.618       Low
cufflinks 88.522     High High
cufflinks 7.095        

0 Strain