Gene : Sobic.003G395200 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR24012:SF415 - F12A21.10-RELATED Genomic Order:  4158
Name:  ? Sobic.003G395200 Secondary Identifier:  ? PAC:37913002
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G395200 0.5kb upstream 0.5kb upstream 4940 true Chr03: 70564382-70569321 Sorghum bicolor
Sobic.003G395200 0.5kb upstream 0.5kb upstream 500 false Chr03: 70564382-70564881 Sorghum bicolor
Sobic.003G395200 0.5kb downstream 0.5kb downstream 4940 true Chr03: 70564882-70569821 Sorghum bicolor
Sobic.003G395200 0.5kb downstream 0.5kb downstream 500 false Chr03: 70569322-70569821 Sorghum bicolor
Sobic.003G395200 1.0kb upstream 1.0kb upstream 5440 true Chr03: 70563882-70569321 Sorghum bicolor
Sobic.003G395200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 70563882-70564881 Sorghum bicolor
Sobic.003G395200 1.0kb downstream 1.0kb downstream 5440 true Chr03: 70564882-70570321 Sorghum bicolor
Sobic.003G395200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 70569322-70570321 Sorghum bicolor
Sobic.003G395200 2.0kb upstream 2.0kb upstream 6440 true Chr03: 70562882-70569321 Sorghum bicolor
Sobic.003G395200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 70562882-70564881 Sorghum bicolor
Sobic.003G395200 2.0kb downstream 2.0kb downstream 6440 true Chr03: 70564882-70571321 Sorghum bicolor
Sobic.003G395200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 70569322-70571321 Sorghum bicolor
Sobic.003G395200 5.0kb upstream 5.0kb upstream 9440 true Chr03: 70559882-70569321 Sorghum bicolor
Sobic.003G395200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 70559882-70564881 Sorghum bicolor
Sobic.003G395200 5.0kb downstream 5.0kb downstream 9440 true Chr03: 70564882-70574321 Sorghum bicolor
Sobic.003G395200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 70569322-70574321 Sorghum bicolor
Sobic.003G395200 10.0kb upstream 10.0kb upstream 14440 true Chr03: 70554882-70569321 Sorghum bicolor
Sobic.003G395200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 70554882-70564881 Sorghum bicolor
Sobic.003G395200 10.0kb downstream 10.0kb downstream 14440 true Chr03: 70564882-70579321 Sorghum bicolor
Sobic.003G395200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 70569322-70579321 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187950 5267 Panicoideae View MSA
124576674 5269 Grass View MSA
122044254 5273 Angiosperm View MSA
121348969 5274 Embryophyte View MSA
123381105 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.091        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.152        
cufflinks 0.246        
cufflinks 0.019     Low  
cufflinks 0.111        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073     Low  
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 4.095       High
cufflinks 0.1     Low  
cufflinks 0.137        
cufflinks 0.218        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain