Gene : Sobic.003G398700 S. bicolor v3.1.1
Defline:  (1 of 1) K15210 - snRNA-activating protein complex subunit 3 (SNAPC3) Genomic Order:  4194
Name:  ? Sobic.003G398700 Secondary Identifier:  ? PAC:37914474
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G398700 0.5kb upstream 0.5kb upstream 5066 true Chr03: 70807484-70812549 Sorghum bicolor
Sobic.003G398700 0.5kb upstream 0.5kb upstream 500 false Chr03: 70807484-70807983 Sorghum bicolor
Sobic.003G398700 0.5kb downstream 0.5kb downstream 5066 true Chr03: 70807984-70813049 Sorghum bicolor
Sobic.003G398700 0.5kb downstream 0.5kb downstream 500 false Chr03: 70812550-70813049 Sorghum bicolor
Sobic.003G398700 1.0kb upstream 1.0kb upstream 5566 true Chr03: 70806984-70812549 Sorghum bicolor
Sobic.003G398700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 70806984-70807983 Sorghum bicolor
Sobic.003G398700 1.0kb downstream 1.0kb downstream 5566 true Chr03: 70807984-70813549 Sorghum bicolor
Sobic.003G398700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 70812550-70813549 Sorghum bicolor
Sobic.003G398700 2.0kb upstream 2.0kb upstream 6566 true Chr03: 70805984-70812549 Sorghum bicolor
Sobic.003G398700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 70805984-70807983 Sorghum bicolor
Sobic.003G398700 2.0kb downstream 2.0kb downstream 6566 true Chr03: 70807984-70814549 Sorghum bicolor
Sobic.003G398700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 70812550-70814549 Sorghum bicolor
Sobic.003G398700 5.0kb upstream 5.0kb upstream 9566 true Chr03: 70802984-70812549 Sorghum bicolor
Sobic.003G398700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 70802984-70807983 Sorghum bicolor
Sobic.003G398700 5.0kb downstream 5.0kb downstream 9566 true Chr03: 70807984-70817549 Sorghum bicolor
Sobic.003G398700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 70812550-70817549 Sorghum bicolor
Sobic.003G398700 10.0kb upstream 10.0kb upstream 14566 true Chr03: 70797984-70812549 Sorghum bicolor
Sobic.003G398700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 70797984-70807983 Sorghum bicolor
Sobic.003G398700 10.0kb downstream 10.0kb downstream 14566 true Chr03: 70807984-70822549 Sorghum bicolor
Sobic.003G398700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 70812550-70822549 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187590 5267 Panicoideae View MSA
124573013 5269 Grass View MSA
122043985 5273 Angiosperm View MSA
121347836 5274 Embryophyte View MSA
123424819 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.947        
cufflinks 6.932     High High
cufflinks 5.294        
cufflinks 4.582        
cufflinks 4.202        
cufflinks 4.38        
cufflinks 5.48        
cufflinks 4.309        
cufflinks 6.71       High
cufflinks 6.062        
cufflinks 4.174        
cufflinks 6.023        
cufflinks 4.994        
cufflinks 4.276        
cufflinks 5.018        
cufflinks 7.463       High
cufflinks 4.677        
cufflinks 5.545        
cufflinks 6.703       High
cufflinks 6.6       High
cufflinks 8.905       High
cufflinks 3.971        
cufflinks 5.116        
cufflinks 4.616        
cufflinks 7.12       High
cufflinks 6.409     High  
cufflinks 4.579        
cufflinks 3.997        
cufflinks 2.835       Low
cufflinks 5.704        

0 Strain