Gene : Sobic.003G401900 S. bicolor v3.1.1
Genomic Order:  4228 Name:  ? Sobic.003G401900
Secondary Identifier:  ? PAC:37913518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G401900 0.5kb upstream 0.5kb upstream 4242 true Chr03: 71017308-71021549 Sorghum bicolor
Sobic.003G401900 0.5kb upstream 0.5kb upstream 500 false Chr03: 71021050-71021549 Sorghum bicolor
Sobic.003G401900 0.5kb downstream 0.5kb downstream 4242 true Chr03: 71016808-71021049 Sorghum bicolor
Sobic.003G401900 0.5kb downstream 0.5kb downstream 500 false Chr03: 71016808-71017307 Sorghum bicolor
Sobic.003G401900 1.0kb upstream 1.0kb upstream 4742 true Chr03: 71017308-71022049 Sorghum bicolor
Sobic.003G401900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 71021050-71022049 Sorghum bicolor
Sobic.003G401900 1.0kb downstream 1.0kb downstream 4742 true Chr03: 71016308-71021049 Sorghum bicolor
Sobic.003G401900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 71016308-71017307 Sorghum bicolor
Sobic.003G401900 2.0kb upstream 2.0kb upstream 5742 true Chr03: 71017308-71023049 Sorghum bicolor
Sobic.003G401900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 71021050-71023049 Sorghum bicolor
Sobic.003G401900 2.0kb downstream 2.0kb downstream 5742 true Chr03: 71015308-71021049 Sorghum bicolor
Sobic.003G401900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 71015308-71017307 Sorghum bicolor
Sobic.003G401900 5.0kb upstream 5.0kb upstream 8742 true Chr03: 71017308-71026049 Sorghum bicolor
Sobic.003G401900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 71021050-71026049 Sorghum bicolor
Sobic.003G401900 5.0kb downstream 5.0kb downstream 8742 true Chr03: 71012308-71021049 Sorghum bicolor
Sobic.003G401900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 71012308-71017307 Sorghum bicolor
Sobic.003G401900 10.0kb upstream 10.0kb upstream 13742 true Chr03: 71017308-71031049 Sorghum bicolor
Sobic.003G401900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 71021050-71031049 Sorghum bicolor
Sobic.003G401900 10.0kb downstream 10.0kb downstream 13742 true Chr03: 71007308-71021049 Sorghum bicolor
Sobic.003G401900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 71007308-71017307 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179819 5267 Panicoideae View MSA
124587961 5269 Grass View MSA
122048705 5273 Angiosperm View MSA
121347737 5274 Embryophyte View MSA
123380610 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.004        
cufflinks 0.128       Low
cufflinks 0.051     Low Low
cufflinks 0.101       Low
cufflinks 4.263       High
cufflinks 0.544        
cufflinks 1.809        
cufflinks 1.117        
cufflinks 0.62        
cufflinks 0.628        
cufflinks 1.153        
cufflinks 0.959        
cufflinks 0.982        
cufflinks 1.306        
cufflinks 1.455        
cufflinks 0.015     Low Low
cufflinks 1.747        
cufflinks 2.103        
cufflinks 0.249       Low
cufflinks 2.498        
cufflinks 1.553        
cufflinks 1.23        
cufflinks 1.096        
cufflinks 0.971        
cufflinks 0.22       Low
cufflinks 0.21       Low
cufflinks 0.64        
cufflinks 1.188        
cufflinks 1.544        
cufflinks 2.586        

0 Strain