Gene : Sobic.003G404000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31155//PTHR31155:SF9 - ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED // ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 7, CHLOROPLASTIC Genomic Order:  4248
Name:  ? Sobic.003G404000 Secondary Identifier:  ? PAC:37917228
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5147 Sorghum bicolor pathologic  
Sbicolor PWY-5156 Sorghum bicolor pathologic  
Sbicolor PWY-5366 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G404000 0.5kb upstream 0.5kb upstream 5324 true Chr03: 71173869-71179192 Sorghum bicolor
Sobic.003G404000 0.5kb upstream 0.5kb upstream 500 false Chr03: 71178693-71179192 Sorghum bicolor
Sobic.003G404000 0.5kb downstream 0.5kb downstream 5324 true Chr03: 71173369-71178692 Sorghum bicolor
Sobic.003G404000 0.5kb downstream 0.5kb downstream 500 false Chr03: 71173369-71173868 Sorghum bicolor
Sobic.003G404000 1.0kb upstream 1.0kb upstream 5824 true Chr03: 71173869-71179692 Sorghum bicolor
Sobic.003G404000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 71178693-71179692 Sorghum bicolor
Sobic.003G404000 1.0kb downstream 1.0kb downstream 5824 true Chr03: 71172869-71178692 Sorghum bicolor
Sobic.003G404000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 71172869-71173868 Sorghum bicolor
Sobic.003G404000 2.0kb upstream 2.0kb upstream 6824 true Chr03: 71173869-71180692 Sorghum bicolor
Sobic.003G404000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 71178693-71180692 Sorghum bicolor
Sobic.003G404000 2.0kb downstream 2.0kb downstream 6824 true Chr03: 71171869-71178692 Sorghum bicolor
Sobic.003G404000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 71171869-71173868 Sorghum bicolor
Sobic.003G404000 5.0kb upstream 5.0kb upstream 9824 true Chr03: 71173869-71183692 Sorghum bicolor
Sobic.003G404000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 71178693-71183692 Sorghum bicolor
Sobic.003G404000 5.0kb downstream 5.0kb downstream 9824 true Chr03: 71168869-71178692 Sorghum bicolor
Sobic.003G404000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 71168869-71173868 Sorghum bicolor
Sobic.003G404000 10.0kb upstream 10.0kb upstream 14824 true Chr03: 71173869-71188692 Sorghum bicolor
Sobic.003G404000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 71178693-71188692 Sorghum bicolor
Sobic.003G404000 10.0kb downstream 10.0kb downstream 14824 true Chr03: 71163869-71178692 Sorghum bicolor
Sobic.003G404000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 71163869-71173868 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186878 5267 Panicoideae View MSA
124575244 5269 Grass View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.217     High Low
cufflinks 149.675     High High
cufflinks 71.414     High  
cufflinks 78.758     High  
cufflinks 29.605     High  
cufflinks 119.88     High High
cufflinks 112.447     High High
cufflinks 123.302     High High
cufflinks 106.022     High  
cufflinks 86.668     High  
cufflinks 23.481     High Low
cufflinks 31.842     High  
cufflinks 69.233     High  
cufflinks 30.605     High  
cufflinks 59.953     High  
cufflinks 118.31     High High
cufflinks 117.906     High High
cufflinks 110.696     High  
cufflinks 117.598     High High
cufflinks 95.124     High  
cufflinks 34.522     High  
cufflinks 29.208     High Low
cufflinks 34.535     High  
cufflinks 32.184     High  
cufflinks 77.761     High  
cufflinks 127.632     High High
cufflinks 28.426     High Low
cufflinks 112.159     High High
cufflinks 138.262     High High
cufflinks 55.349     High  

0 Strain