Gene : Sobic.003G404500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11566//PTHR11566:SF75 - DYNAMIN // DYNAMIN-RELATED PROTEIN 3A-RELATED Genomic Order:  4254
Name:  ? Sobic.003G404500 Secondary Identifier:  ? PAC:37917925
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G404500 0.5kb upstream 0.5kb upstream 7791 true Chr03: 71208317-71216107 Sorghum bicolor
Sobic.003G404500 0.5kb upstream 0.5kb upstream 500 false Chr03: 71215608-71216107 Sorghum bicolor
Sobic.003G404500 0.5kb downstream 0.5kb downstream 7791 true Chr03: 71207817-71215607 Sorghum bicolor
Sobic.003G404500 0.5kb downstream 0.5kb downstream 500 false Chr03: 71207817-71208316 Sorghum bicolor
Sobic.003G404500 1.0kb upstream 1.0kb upstream 8291 true Chr03: 71208317-71216607 Sorghum bicolor
Sobic.003G404500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 71215608-71216607 Sorghum bicolor
Sobic.003G404500 1.0kb downstream 1.0kb downstream 8291 true Chr03: 71207317-71215607 Sorghum bicolor
Sobic.003G404500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 71207317-71208316 Sorghum bicolor
Sobic.003G404500 2.0kb upstream 2.0kb upstream 9291 true Chr03: 71208317-71217607 Sorghum bicolor
Sobic.003G404500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 71215608-71217607 Sorghum bicolor
Sobic.003G404500 2.0kb downstream 2.0kb downstream 9291 true Chr03: 71206317-71215607 Sorghum bicolor
Sobic.003G404500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 71206317-71208316 Sorghum bicolor
Sobic.003G404500 5.0kb upstream 5.0kb upstream 12291 true Chr03: 71208317-71220607 Sorghum bicolor
Sobic.003G404500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 71215608-71220607 Sorghum bicolor
Sobic.003G404500 5.0kb downstream 5.0kb downstream 12291 true Chr03: 71203317-71215607 Sorghum bicolor
Sobic.003G404500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 71203317-71208316 Sorghum bicolor
Sobic.003G404500 10.0kb upstream 10.0kb upstream 17291 true Chr03: 71208317-71225607 Sorghum bicolor
Sobic.003G404500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 71215608-71225607 Sorghum bicolor
Sobic.003G404500 10.0kb downstream 10.0kb downstream 17291 true Chr03: 71198317-71215607 Sorghum bicolor
Sobic.003G404500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 71198317-71208316 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195880 5267 Panicoideae View MSA
124573557 5269 Grass View MSA
122042002 5273 Angiosperm View MSA
121348678 5274 Embryophyte View MSA
123426540 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.09       Low
cufflinks 12.632     High Low
cufflinks 18.798     High  
cufflinks 14.176     High  
cufflinks 16.008     High  
cufflinks 15.662     High  
cufflinks 15.615     High  
cufflinks 10.355     High Low
cufflinks 21.224     High High
cufflinks 23.484     High High
cufflinks 17.86     High  
cufflinks 20.431     High  
cufflinks 21.14     High High
cufflinks 18.031     High  
cufflinks 18.055     High  
cufflinks 13.498     High  
cufflinks 14.139     High  
cufflinks 15.746     High  
cufflinks 19.006     High  
cufflinks 17.111     High  
cufflinks 14.177     High  
cufflinks 19.513     High  
cufflinks 21.572     High High
cufflinks 21.541     High High
cufflinks 16.505     High  
cufflinks 11.935     High Low
cufflinks 16.391     High  
cufflinks 7.675       Low
cufflinks 11.885     High Low
cufflinks 19.027     High  

0 Strain