Gene : Sobic.003G404200 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  4251
Name:  ? Sobic.003G404200 Secondary Identifier:  ? PAC:37916742
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G404200 0.5kb upstream 0.5kb upstream 3261 true Chr03: 71195622-71198882 Sorghum bicolor
Sobic.003G404200 0.5kb upstream 0.5kb upstream 500 false Chr03: 71195622-71196121 Sorghum bicolor
Sobic.003G404200 0.5kb downstream 0.5kb downstream 3261 true Chr03: 71196122-71199382 Sorghum bicolor
Sobic.003G404200 0.5kb downstream 0.5kb downstream 500 false Chr03: 71198883-71199382 Sorghum bicolor
Sobic.003G404200 1.0kb upstream 1.0kb upstream 3761 true Chr03: 71195122-71198882 Sorghum bicolor
Sobic.003G404200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 71195122-71196121 Sorghum bicolor
Sobic.003G404200 1.0kb downstream 1.0kb downstream 3761 true Chr03: 71196122-71199882 Sorghum bicolor
Sobic.003G404200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 71198883-71199882 Sorghum bicolor
Sobic.003G404200 2.0kb upstream 2.0kb upstream 4761 true Chr03: 71194122-71198882 Sorghum bicolor
Sobic.003G404200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 71194122-71196121 Sorghum bicolor
Sobic.003G404200 2.0kb downstream 2.0kb downstream 4761 true Chr03: 71196122-71200882 Sorghum bicolor
Sobic.003G404200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 71198883-71200882 Sorghum bicolor
Sobic.003G404200 5.0kb upstream 5.0kb upstream 7761 true Chr03: 71191122-71198882 Sorghum bicolor
Sobic.003G404200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 71191122-71196121 Sorghum bicolor
Sobic.003G404200 5.0kb downstream 5.0kb downstream 7761 true Chr03: 71196122-71203882 Sorghum bicolor
Sobic.003G404200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 71198883-71203882 Sorghum bicolor
Sobic.003G404200 10.0kb upstream 10.0kb upstream 12761 true Chr03: 71186122-71198882 Sorghum bicolor
Sobic.003G404200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 71186122-71196121 Sorghum bicolor
Sobic.003G404200 10.0kb downstream 10.0kb downstream 12761 true Chr03: 71196122-71208882 Sorghum bicolor
Sobic.003G404200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 71198883-71208882 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197589 5267 Panicoideae View MSA
124590909 5269 Grass View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.765     High  
cufflinks 10.941     High Low
cufflinks 12.03     High Low
cufflinks 34.338     High  
cufflinks 13.914     High  
cufflinks 37.506     High High
cufflinks 12.365     High Low
cufflinks 16.321     High  
cufflinks 52.532     High High
cufflinks 35.625     High High
cufflinks 17.93     High  
cufflinks 32.92     High  
cufflinks 24.959     High  
cufflinks 36.639     High High
cufflinks 32.147     High  
cufflinks 35.732     High High
cufflinks 18.28     High  
cufflinks 11.214       Low
cufflinks 26.518     High  
cufflinks 55.48     High High
cufflinks 12.594       Low
cufflinks 19.723     High  
cufflinks 25.483     High  
cufflinks 23.424     High  
cufflinks 15.717     High  
cufflinks 7.904     High Low
cufflinks 21.787     High  
cufflinks 6.38       Low
cufflinks 10.665       Low
cufflinks 25.482     High  

0 Strain