Gene : Sobic.003G408500 S. bicolor v3.1.1
Defline:  (1 of 2) K08334 - beclin 1 (BECN1, VPS30, ATG6) Genomic Order:  4298
Name:  ? Sobic.003G408500 Secondary Identifier:  ? PAC:37912703
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G408500 0.5kb upstream 0.5kb upstream 5683 true Chr03: 71626929-71632611 Sorghum bicolor
Sobic.003G408500 0.5kb upstream 0.5kb upstream 500 false Chr03: 71626929-71627428 Sorghum bicolor
Sobic.003G408500 0.5kb downstream 0.5kb downstream 5683 true Chr03: 71627429-71633111 Sorghum bicolor
Sobic.003G408500 0.5kb downstream 0.5kb downstream 500 false Chr03: 71632612-71633111 Sorghum bicolor
Sobic.003G408500 1.0kb upstream 1.0kb upstream 6183 true Chr03: 71626429-71632611 Sorghum bicolor
Sobic.003G408500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 71626429-71627428 Sorghum bicolor
Sobic.003G408500 1.0kb downstream 1.0kb downstream 6183 true Chr03: 71627429-71633611 Sorghum bicolor
Sobic.003G408500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 71632612-71633611 Sorghum bicolor
Sobic.003G408500 2.0kb upstream 2.0kb upstream 7183 true Chr03: 71625429-71632611 Sorghum bicolor
Sobic.003G408500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 71625429-71627428 Sorghum bicolor
Sobic.003G408500 2.0kb downstream 2.0kb downstream 7183 true Chr03: 71627429-71634611 Sorghum bicolor
Sobic.003G408500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 71632612-71634611 Sorghum bicolor
Sobic.003G408500 5.0kb upstream 5.0kb upstream 10183 true Chr03: 71622429-71632611 Sorghum bicolor
Sobic.003G408500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 71622429-71627428 Sorghum bicolor
Sobic.003G408500 5.0kb downstream 5.0kb downstream 10183 true Chr03: 71627429-71637611 Sorghum bicolor
Sobic.003G408500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 71632612-71637611 Sorghum bicolor
Sobic.003G408500 10.0kb upstream 10.0kb upstream 15183 true Chr03: 71617429-71632611 Sorghum bicolor
Sobic.003G408500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 71617429-71627428 Sorghum bicolor
Sobic.003G408500 10.0kb downstream 10.0kb downstream 15183 true Chr03: 71627429-71642611 Sorghum bicolor
Sobic.003G408500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 71632612-71642611 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187731 5267 Panicoideae View MSA
124586209 5269 Grass View MSA
122047778 5273 Angiosperm View MSA
121344553 5274 Embryophyte View MSA
123428819 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.732       Low
cufflinks 3.423        
cufflinks 3.751        
cufflinks 4.676        
cufflinks 3.649        
cufflinks 4.809        
cufflinks 2.933        
cufflinks 2.593       Low
cufflinks 6.838       High
cufflinks 6.421       High
cufflinks 5.002        
cufflinks 5.881       High
cufflinks 4.231        
cufflinks 4.423        
cufflinks 4.135        
cufflinks 4.464        
cufflinks 2.954        
cufflinks 3.067        
cufflinks 4.818        
cufflinks 4.75        
cufflinks 4.6        
cufflinks 3.843        
cufflinks 4.504        
cufflinks 3.776        
cufflinks 5.988       High
cufflinks 3.68        
cufflinks 4.752        
cufflinks 4.904        
cufflinks 1.885       Low
cufflinks 4.25        

0 Strain