Gene : Sobic.003G344200 S. bicolor v3.1.1
Defline:  (1 of 61) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Genomic Order:  3616
Name:  ? Sobic.003G344200 Secondary Identifier:  ? PAC:37916792
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G344200 0.5kb upstream 0.5kb upstream 14617 true Chr03: 66565338-66579954 Sorghum bicolor
Sobic.003G344200 0.5kb upstream 0.5kb upstream 500 false Chr03: 66565338-66565837 Sorghum bicolor
Sobic.003G344200 0.5kb downstream 0.5kb downstream 14617 true Chr03: 66565838-66580454 Sorghum bicolor
Sobic.003G344200 0.5kb downstream 0.5kb downstream 500 false Chr03: 66579955-66580454 Sorghum bicolor
Sobic.003G344200 1.0kb upstream 1.0kb upstream 15117 true Chr03: 66564838-66579954 Sorghum bicolor
Sobic.003G344200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 66564838-66565837 Sorghum bicolor
Sobic.003G344200 1.0kb downstream 1.0kb downstream 15117 true Chr03: 66565838-66580954 Sorghum bicolor
Sobic.003G344200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 66579955-66580954 Sorghum bicolor
Sobic.003G344200 2.0kb upstream 2.0kb upstream 16117 true Chr03: 66563838-66579954 Sorghum bicolor
Sobic.003G344200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 66563838-66565837 Sorghum bicolor
Sobic.003G344200 2.0kb downstream 2.0kb downstream 16117 true Chr03: 66565838-66581954 Sorghum bicolor
Sobic.003G344200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 66579955-66581954 Sorghum bicolor
Sobic.003G344200 5.0kb upstream 5.0kb upstream 19117 true Chr03: 66560838-66579954 Sorghum bicolor
Sobic.003G344200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 66560838-66565837 Sorghum bicolor
Sobic.003G344200 5.0kb downstream 5.0kb downstream 19117 true Chr03: 66565838-66584954 Sorghum bicolor
Sobic.003G344200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 66579955-66584954 Sorghum bicolor
Sobic.003G344200 10.0kb upstream 10.0kb upstream 24117 true Chr03: 66555838-66579954 Sorghum bicolor
Sobic.003G344200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 66555838-66565837 Sorghum bicolor
Sobic.003G344200 10.0kb downstream 10.0kb downstream 24117 true Chr03: 66565838-66589954 Sorghum bicolor
Sobic.003G344200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 66579955-66589954 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195946 5267 Panicoideae View MSA
124571564 5269 Grass View MSA
122051004 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121312244 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.096       Low
cufflinks 0.442        
cufflinks 1.156        
cufflinks 1.378        
cufflinks 0.008     Low Low
cufflinks 0.977        
cufflinks 0.37        
cufflinks 0.765        
cufflinks 0.846        
cufflinks 0.799        
cufflinks 2.743       High
cufflinks 3.763       High
cufflinks 0.153        
cufflinks 3.666       High
cufflinks 0.577        
cufflinks 0.731        
cufflinks 0.376        
cufflinks 0.251        
cufflinks 1.366        
cufflinks 0.65        
cufflinks 0.01     Low Low
cufflinks 2.044        
cufflinks 2.965       High
cufflinks 3.023       High
cufflinks 1.437        
cufflinks 0.765        
cufflinks 2.194        
cufflinks 0.068     Low Low
cufflinks 0.201        
cufflinks 0.76        

0 Strain