Gene : Sobic.001G084900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13193//PTHR13193:SF0 - CGI-140 // PROTEIN ASTERIX Genomic Order:  866
Name:  ? Sobic.001G084900 Secondary Identifier:  ? PAC:37940647
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G084900 0.5kb upstream 0.5kb upstream 5452 true Chr01: 6558080-6563531 Sorghum bicolor
Sobic.001G084900 0.5kb upstream 0.5kb upstream 500 false Chr01: 6563032-6563531 Sorghum bicolor
Sobic.001G084900 0.5kb downstream 0.5kb downstream 5452 true Chr01: 6557580-6563031 Sorghum bicolor
Sobic.001G084900 0.5kb downstream 0.5kb downstream 500 false Chr01: 6557580-6558079 Sorghum bicolor
Sobic.001G084900 1.0kb upstream 1.0kb upstream 5952 true Chr01: 6558080-6564031 Sorghum bicolor
Sobic.001G084900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6563032-6564031 Sorghum bicolor
Sobic.001G084900 1.0kb downstream 1.0kb downstream 5952 true Chr01: 6557080-6563031 Sorghum bicolor
Sobic.001G084900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6557080-6558079 Sorghum bicolor
Sobic.001G084900 2.0kb upstream 2.0kb upstream 6952 true Chr01: 6558080-6565031 Sorghum bicolor
Sobic.001G084900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6563032-6565031 Sorghum bicolor
Sobic.001G084900 2.0kb downstream 2.0kb downstream 6952 true Chr01: 6556080-6563031 Sorghum bicolor
Sobic.001G084900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6556080-6558079 Sorghum bicolor
Sobic.001G084900 5.0kb upstream 5.0kb upstream 9952 true Chr01: 6558080-6568031 Sorghum bicolor
Sobic.001G084900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6563032-6568031 Sorghum bicolor
Sobic.001G084900 5.0kb downstream 5.0kb downstream 9952 true Chr01: 6553080-6563031 Sorghum bicolor
Sobic.001G084900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6553080-6558079 Sorghum bicolor
Sobic.001G084900 10.0kb upstream 10.0kb upstream 14952 true Chr01: 6558080-6573031 Sorghum bicolor
Sobic.001G084900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6563032-6573031 Sorghum bicolor
Sobic.001G084900 10.0kb downstream 10.0kb downstream 14952 true Chr01: 6548080-6563031 Sorghum bicolor
Sobic.001G084900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6548080-6558079 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178557 5267 Panicoideae View MSA
124583127 5269 Grass View MSA
122043148 5273 Angiosperm View MSA
121344869 5274 Embryophyte View MSA
123425690 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.118     High High
cufflinks 2.75       Low
cufflinks 6.489        
cufflinks 12.653     High High
cufflinks 7.979        
cufflinks 8.153        
cufflinks 6.216        
cufflinks 3.282       Low
cufflinks 6.485        
cufflinks 7.287        
cufflinks 8.576        
cufflinks 6.884        
cufflinks 6.079        
cufflinks 8.511        
cufflinks 9.755        
cufflinks 8.194        
cufflinks 6.278        
cufflinks 5.818        
cufflinks 7.076        
cufflinks 8.041        
cufflinks 6.834        
cufflinks 12.86     High High
cufflinks 8.153        
cufflinks 8.26        
cufflinks 3.609       Low
cufflinks 2.225       Low
cufflinks 6.61        
cufflinks 14.269     High High
cufflinks 5.151        
cufflinks 8.223        

0 Strain