Gene : Sobic.001G077200 S. bicolor v3.1.1
Defline:  (1 of 12) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  786
Name:  ? Sobic.001G077200 Secondary Identifier:  ? PAC:37941569
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G077200 0.5kb upstream 0.5kb upstream 7210 true Chr01: 5923250-5930459 Sorghum bicolor
Sobic.001G077200 0.5kb upstream 0.5kb upstream 500 false Chr01: 5929960-5930459 Sorghum bicolor
Sobic.001G077200 0.5kb downstream 0.5kb downstream 7210 true Chr01: 5922750-5929959 Sorghum bicolor
Sobic.001G077200 0.5kb downstream 0.5kb downstream 500 false Chr01: 5922750-5923249 Sorghum bicolor
Sobic.001G077200 1.0kb upstream 1.0kb upstream 7710 true Chr01: 5923250-5930959 Sorghum bicolor
Sobic.001G077200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5929960-5930959 Sorghum bicolor
Sobic.001G077200 1.0kb downstream 1.0kb downstream 7710 true Chr01: 5922250-5929959 Sorghum bicolor
Sobic.001G077200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5922250-5923249 Sorghum bicolor
Sobic.001G077200 2.0kb upstream 2.0kb upstream 8710 true Chr01: 5923250-5931959 Sorghum bicolor
Sobic.001G077200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5929960-5931959 Sorghum bicolor
Sobic.001G077200 2.0kb downstream 2.0kb downstream 8710 true Chr01: 5921250-5929959 Sorghum bicolor
Sobic.001G077200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5921250-5923249 Sorghum bicolor
Sobic.001G077200 5.0kb upstream 5.0kb upstream 11710 true Chr01: 5923250-5934959 Sorghum bicolor
Sobic.001G077200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5929960-5934959 Sorghum bicolor
Sobic.001G077200 5.0kb downstream 5.0kb downstream 11710 true Chr01: 5918250-5929959 Sorghum bicolor
Sobic.001G077200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5918250-5923249 Sorghum bicolor
Sobic.001G077200 10.0kb upstream 10.0kb upstream 16710 true Chr01: 5923250-5939959 Sorghum bicolor
Sobic.001G077200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5929960-5939959 Sorghum bicolor
Sobic.001G077200 10.0kb downstream 10.0kb downstream 16710 true Chr01: 5913250-5929959 Sorghum bicolor
Sobic.001G077200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5913250-5923249 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184094 5267 Panicoideae View MSA
124585068 5269 Grass View MSA
122048903 5273 Angiosperm View MSA
121311163 5274 Embryophyte View MSA
123348497 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.992        
cufflinks 0.016     Low Low
cufflinks 0.005     Low Low
cufflinks 0.018     Low Low
cufflinks 3.513        
cufflinks 0.259        
cufflinks 1.393        
cufflinks 0.201        
cufflinks 0.125        
cufflinks 0.227        
cufflinks 1.71        
cufflinks 2.158        
cufflinks 0.629        
cufflinks 3.803        
cufflinks 0.764        
cufflinks 0.012     Low Low
cufflinks 1.4        
cufflinks 1.271        
cufflinks 0.218        
cufflinks 0.952        
cufflinks 2.586        
cufflinks 5.057       High
cufflinks 2.41        
cufflinks 2.615        
cufflinks 0.024     Low Low
cufflinks 0.04       Low
cufflinks 0.69        
cufflinks 0.027     Low Low
cufflinks 1.023        
cufflinks 2.002        

0 Strain