Gene : Sobic.001G077900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12869//PTHR12869:SF0 - SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN // TRANSMEMBRANE PROTEIN 147 Genomic Order:  793
Name:  ? Sobic.001G077900 Secondary Identifier:  ? PAC:37939104
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G077900 0.5kb upstream 0.5kb upstream 5212 true Chr01: 5966521-5971732 Sorghum bicolor
Sobic.001G077900 0.5kb upstream 0.5kb upstream 500 false Chr01: 5966521-5967020 Sorghum bicolor
Sobic.001G077900 0.5kb downstream 0.5kb downstream 5212 true Chr01: 5967021-5972232 Sorghum bicolor
Sobic.001G077900 0.5kb downstream 0.5kb downstream 500 false Chr01: 5971733-5972232 Sorghum bicolor
Sobic.001G077900 1.0kb upstream 1.0kb upstream 5712 true Chr01: 5966021-5971732 Sorghum bicolor
Sobic.001G077900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5966021-5967020 Sorghum bicolor
Sobic.001G077900 1.0kb downstream 1.0kb downstream 5712 true Chr01: 5967021-5972732 Sorghum bicolor
Sobic.001G077900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5971733-5972732 Sorghum bicolor
Sobic.001G077900 2.0kb upstream 2.0kb upstream 6712 true Chr01: 5965021-5971732 Sorghum bicolor
Sobic.001G077900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5965021-5967020 Sorghum bicolor
Sobic.001G077900 2.0kb downstream 2.0kb downstream 6712 true Chr01: 5967021-5973732 Sorghum bicolor
Sobic.001G077900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5971733-5973732 Sorghum bicolor
Sobic.001G077900 5.0kb upstream 5.0kb upstream 9712 true Chr01: 5962021-5971732 Sorghum bicolor
Sobic.001G077900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5962021-5967020 Sorghum bicolor
Sobic.001G077900 5.0kb downstream 5.0kb downstream 9712 true Chr01: 5967021-5976732 Sorghum bicolor
Sobic.001G077900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5971733-5976732 Sorghum bicolor
Sobic.001G077900 10.0kb upstream 10.0kb upstream 14712 true Chr01: 5957021-5971732 Sorghum bicolor
Sobic.001G077900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5957021-5967020 Sorghum bicolor
Sobic.001G077900 10.0kb downstream 10.0kb downstream 14712 true Chr01: 5967021-5981732 Sorghum bicolor
Sobic.001G077900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5971733-5981732 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184243 5267 Panicoideae View MSA
124583772 5269 Grass View MSA
122046816 5273 Angiosperm View MSA
121343820 5274 Embryophyte View MSA
123379923 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.538     High High
cufflinks 1.706       Low
cufflinks 4.823       Low
cufflinks 9.447        
cufflinks 10.254        
cufflinks 7.952        
cufflinks 9.256        
cufflinks 3.204       Low
cufflinks 10.26        
cufflinks 11.611        
cufflinks 11.572        
cufflinks 12.06     High  
cufflinks 9.135        
cufflinks 15.227     High  
cufflinks 9.754        
cufflinks 4.837       Low
cufflinks 10.275        
cufflinks 10.931        
cufflinks 4.897       Low
cufflinks 12.163     High  
cufflinks 6.461        
cufflinks 18.924     High High
cufflinks 16.082     High  
cufflinks 16.169     High  
cufflinks 3.434       Low
cufflinks 1.556       Low
cufflinks 10.049        
cufflinks 7.177        
cufflinks 10.444        
cufflinks 11.232        

0 Strain