Gene : Sobic.003G353400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR22883:SF92 - PROTEIN S-ACYLTRANSFERASE 16-RELATED Genomic Order:  3712
Name:  ? Sobic.003G353400 Secondary Identifier:  ? PAC:37918806
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G353400 0.5kb upstream 0.5kb upstream 4345 true Chr03: 67225322-67229666 Sorghum bicolor
Sobic.003G353400 0.5kb upstream 0.5kb upstream 500 false Chr03: 67229167-67229666 Sorghum bicolor
Sobic.003G353400 0.5kb downstream 0.5kb downstream 4345 true Chr03: 67224822-67229166 Sorghum bicolor
Sobic.003G353400 0.5kb downstream 0.5kb downstream 500 false Chr03: 67224822-67225321 Sorghum bicolor
Sobic.003G353400 1.0kb upstream 1.0kb upstream 4845 true Chr03: 67225322-67230166 Sorghum bicolor
Sobic.003G353400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 67229167-67230166 Sorghum bicolor
Sobic.003G353400 1.0kb downstream 1.0kb downstream 4845 true Chr03: 67224322-67229166 Sorghum bicolor
Sobic.003G353400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 67224322-67225321 Sorghum bicolor
Sobic.003G353400 2.0kb upstream 2.0kb upstream 5845 true Chr03: 67225322-67231166 Sorghum bicolor
Sobic.003G353400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 67229167-67231166 Sorghum bicolor
Sobic.003G353400 2.0kb downstream 2.0kb downstream 5845 true Chr03: 67223322-67229166 Sorghum bicolor
Sobic.003G353400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 67223322-67225321 Sorghum bicolor
Sobic.003G353400 5.0kb upstream 5.0kb upstream 8845 true Chr03: 67225322-67234166 Sorghum bicolor
Sobic.003G353400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 67229167-67234166 Sorghum bicolor
Sobic.003G353400 5.0kb downstream 5.0kb downstream 8845 true Chr03: 67220322-67229166 Sorghum bicolor
Sobic.003G353400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 67220322-67225321 Sorghum bicolor
Sobic.003G353400 10.0kb upstream 10.0kb upstream 13845 true Chr03: 67225322-67239166 Sorghum bicolor
Sobic.003G353400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 67229167-67239166 Sorghum bicolor
Sobic.003G353400 10.0kb downstream 10.0kb downstream 13845 true Chr03: 67215322-67229166 Sorghum bicolor
Sobic.003G353400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 67215322-67225321 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187410 5267 Panicoideae View MSA
124583112 5269 Grass View MSA
122049119 5273 Angiosperm View MSA
121349855 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.091     High  
cufflinks 1.949       Low
cufflinks 5.971        
cufflinks 8.371        
cufflinks 13.196     High  
cufflinks 21.693     High  
cufflinks 13.33     High  
cufflinks 8.527        
cufflinks 17.084     High  
cufflinks 12.398     High  
cufflinks 11.856     High  
cufflinks 15.199     High  
cufflinks 40.551     High High
cufflinks 11.609     High  
cufflinks 19.213     High  
cufflinks 2.543       Low
cufflinks 14.309     High  
cufflinks 15.266     High  
cufflinks 4.598       Low
cufflinks 19.684     High  
cufflinks 6.624        
cufflinks 12.291     High  
cufflinks 15.644     High  
cufflinks 13.478     High  
cufflinks 2.715       Low
cufflinks 2.133       Low
cufflinks 12.359     High  
cufflinks 5.464       Low
cufflinks 21.979     High  
cufflinks 14.015     High  

0 Strain