Gene : Sobic.001G075300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10641:SF654 - TRANSCRIPTION FACTOR RAX1-RELATED Genomic Order:  764
Name:  ? Sobic.001G075300 Secondary Identifier:  ? PAC:37937557
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G075300 0.5kb upstream 0.5kb upstream 2298 true Chr01: 5735109-5737406 Sorghum bicolor
Sobic.001G075300 0.5kb upstream 0.5kb upstream 500 false Chr01: 5735109-5735608 Sorghum bicolor
Sobic.001G075300 0.5kb downstream 0.5kb downstream 2298 true Chr01: 5735609-5737906 Sorghum bicolor
Sobic.001G075300 0.5kb downstream 0.5kb downstream 500 false Chr01: 5737407-5737906 Sorghum bicolor
Sobic.001G075300 1.0kb upstream 1.0kb upstream 2798 true Chr01: 5734609-5737406 Sorghum bicolor
Sobic.001G075300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5734609-5735608 Sorghum bicolor
Sobic.001G075300 1.0kb downstream 1.0kb downstream 2798 true Chr01: 5735609-5738406 Sorghum bicolor
Sobic.001G075300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5737407-5738406 Sorghum bicolor
Sobic.001G075300 2.0kb upstream 2.0kb upstream 3798 true Chr01: 5733609-5737406 Sorghum bicolor
Sobic.001G075300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5733609-5735608 Sorghum bicolor
Sobic.001G075300 2.0kb downstream 2.0kb downstream 3798 true Chr01: 5735609-5739406 Sorghum bicolor
Sobic.001G075300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5737407-5739406 Sorghum bicolor
Sobic.001G075300 5.0kb upstream 5.0kb upstream 6798 true Chr01: 5730609-5737406 Sorghum bicolor
Sobic.001G075300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5730609-5735608 Sorghum bicolor
Sobic.001G075300 5.0kb downstream 5.0kb downstream 6798 true Chr01: 5735609-5742406 Sorghum bicolor
Sobic.001G075300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5737407-5742406 Sorghum bicolor
Sobic.001G075300 10.0kb upstream 10.0kb upstream 11798 true Chr01: 5725609-5737406 Sorghum bicolor
Sobic.001G075300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5725609-5735608 Sorghum bicolor
Sobic.001G075300 10.0kb downstream 10.0kb downstream 11798 true Chr01: 5735609-5747406 Sorghum bicolor
Sobic.001G075300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5737407-5747406 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197396 5267 Panicoideae View MSA
124589911 5269 Grass View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.433        
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.198        
cufflinks 0.023     Low Low
cufflinks 0.413        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.129        
cufflinks 24.206     High High
cufflinks 14.585     High High
cufflinks 0.045     Low  
cufflinks 18.725     High High
cufflinks 0.07     Low  
cufflinks 0.018     Low Low
cufflinks 0.183        
cufflinks 0.307        
cufflinks 0.073     Low  
cufflinks 0.325        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.656     High High
cufflinks 16.572     High High
cufflinks 16.4     High High
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 14.541     High High
cufflinks 0.025     Low Low
cufflinks 0.018     Low Low
cufflinks 0.07     Low  

0 Strain