Gene : Sobic.001G067100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR19384:SF54 - FERREDOXIN--NADP REDUCTASE, ROOT ISOZYME 1, CHLOROPLASTIC-RELATED Genomic Order:  677
Name:  ? Sobic.001G067100 Secondary Identifier:  ? PAC:37944065
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PHOTOALL-PWY Sorghum bicolor pathologic  
Sbicolor PWY-101 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G067100 0.5kb upstream 0.5kb upstream 4215 true Chr01: 5083780-5087994 Sorghum bicolor
Sobic.001G067100 0.5kb upstream 0.5kb upstream 500 false Chr01: 5083780-5084279 Sorghum bicolor
Sobic.001G067100 0.5kb downstream 0.5kb downstream 4215 true Chr01: 5084280-5088494 Sorghum bicolor
Sobic.001G067100 0.5kb downstream 0.5kb downstream 500 false Chr01: 5087995-5088494 Sorghum bicolor
Sobic.001G067100 1.0kb upstream 1.0kb upstream 4715 true Chr01: 5083280-5087994 Sorghum bicolor
Sobic.001G067100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5083280-5084279 Sorghum bicolor
Sobic.001G067100 1.0kb downstream 1.0kb downstream 4715 true Chr01: 5084280-5088994 Sorghum bicolor
Sobic.001G067100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5087995-5088994 Sorghum bicolor
Sobic.001G067100 2.0kb upstream 2.0kb upstream 5715 true Chr01: 5082280-5087994 Sorghum bicolor
Sobic.001G067100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5082280-5084279 Sorghum bicolor
Sobic.001G067100 2.0kb downstream 2.0kb downstream 5715 true Chr01: 5084280-5089994 Sorghum bicolor
Sobic.001G067100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5087995-5089994 Sorghum bicolor
Sobic.001G067100 5.0kb upstream 5.0kb upstream 8715 true Chr01: 5079280-5087994 Sorghum bicolor
Sobic.001G067100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5079280-5084279 Sorghum bicolor
Sobic.001G067100 5.0kb downstream 5.0kb downstream 8715 true Chr01: 5084280-5092994 Sorghum bicolor
Sobic.001G067100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5087995-5092994 Sorghum bicolor
Sobic.001G067100 10.0kb upstream 10.0kb upstream 13715 true Chr01: 5074280-5087994 Sorghum bicolor
Sobic.001G067100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5074280-5084279 Sorghum bicolor
Sobic.001G067100 10.0kb downstream 10.0kb downstream 13715 true Chr01: 5084280-5097994 Sorghum bicolor
Sobic.001G067100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5087995-5097994 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194024 5267 Panicoideae View MSA
124591043 5269 Grass View MSA
122045006 5273 Angiosperm View MSA
121347443 5274 Embryophyte View MSA
123424825 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.285     High High
cufflinks 14.173     High  
cufflinks 3.878       Low
cufflinks 5.788       Low
cufflinks 13.698     High  
cufflinks 3.803       Low
cufflinks 8.262        
cufflinks 5.945       Low
cufflinks 12.513     High  
cufflinks 14.033     High  
cufflinks 82.115     High High
cufflinks 33.15     High  
cufflinks 10.543        
cufflinks 100.379     High High
cufflinks 6.415        
cufflinks 14.253     High  
cufflinks 9.167        
cufflinks 9.217        
cufflinks 8.444        
cufflinks 7.83        
cufflinks 7.947        
cufflinks 39.425     High High
cufflinks 40.91     High High
cufflinks 49.379     High High
cufflinks 16.097     High  
cufflinks 5.77       Low
cufflinks 44.154     High High
cufflinks 3.944       Low
cufflinks 7.968        
cufflinks 8.352        

0 Strain