Gene : Sobic.001G067400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR14467 - ARV1 Genomic Order:  680
Name:  ? Sobic.001G067400 Secondary Identifier:  ? PAC:37941958
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G067400 0.5kb upstream 0.5kb upstream 5686 true Chr01: 5097359-5103044 Sorghum bicolor
Sobic.001G067400 0.5kb upstream 0.5kb upstream 500 false Chr01: 5097359-5097858 Sorghum bicolor
Sobic.001G067400 0.5kb downstream 0.5kb downstream 5686 true Chr01: 5097859-5103544 Sorghum bicolor
Sobic.001G067400 0.5kb downstream 0.5kb downstream 500 false Chr01: 5103045-5103544 Sorghum bicolor
Sobic.001G067400 1.0kb upstream 1.0kb upstream 6186 true Chr01: 5096859-5103044 Sorghum bicolor
Sobic.001G067400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5096859-5097858 Sorghum bicolor
Sobic.001G067400 1.0kb downstream 1.0kb downstream 6186 true Chr01: 5097859-5104044 Sorghum bicolor
Sobic.001G067400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5103045-5104044 Sorghum bicolor
Sobic.001G067400 2.0kb upstream 2.0kb upstream 7186 true Chr01: 5095859-5103044 Sorghum bicolor
Sobic.001G067400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5095859-5097858 Sorghum bicolor
Sobic.001G067400 2.0kb downstream 2.0kb downstream 7186 true Chr01: 5097859-5105044 Sorghum bicolor
Sobic.001G067400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5103045-5105044 Sorghum bicolor
Sobic.001G067400 5.0kb upstream 5.0kb upstream 10186 true Chr01: 5092859-5103044 Sorghum bicolor
Sobic.001G067400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5092859-5097858 Sorghum bicolor
Sobic.001G067400 5.0kb downstream 5.0kb downstream 10186 true Chr01: 5097859-5108044 Sorghum bicolor
Sobic.001G067400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5103045-5108044 Sorghum bicolor
Sobic.001G067400 10.0kb upstream 10.0kb upstream 15186 true Chr01: 5087859-5103044 Sorghum bicolor
Sobic.001G067400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5087859-5097858 Sorghum bicolor
Sobic.001G067400 10.0kb downstream 10.0kb downstream 15186 true Chr01: 5097859-5113044 Sorghum bicolor
Sobic.001G067400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5103045-5113044 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175598 5267 Panicoideae View MSA
124573651 5269 Grass View MSA
122045663 5273 Angiosperm View MSA
121347718 5274 Embryophyte View MSA
123380605 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.29       High
cufflinks 0.436       Low
cufflinks 1.503        
cufflinks 2.112        
cufflinks 2.748       High
cufflinks 2.824       High
cufflinks 1.13        
cufflinks 0.403       Low
cufflinks 3.081       High
cufflinks 2.649       High
cufflinks 1.163        
cufflinks 1.757        
cufflinks 2.173        
cufflinks 1.983        
cufflinks 1.524        
cufflinks 0.751       Low
cufflinks 1.009        
cufflinks 1.162        
cufflinks 0.953        
cufflinks 1.506        
cufflinks 2.879       High
cufflinks 1.418        
cufflinks 1.278        
cufflinks 1.471        
cufflinks 1.052        
cufflinks 0.378       Low
cufflinks 1.972        
cufflinks 2.781       High
cufflinks 0.668       Low
cufflinks 1.594        

0 Strain