Gene : Sobic.001G065300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11390//PTHR11390:SF25 - PROKARYOTIC DNA TOPOISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  660
Name:  ? Sobic.001G065300 Secondary Identifier:  ? PAC:37944150
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G065300 0.5kb upstream 0.5kb upstream 7882 true Chr01: 4942952-4950833 Sorghum bicolor
Sobic.001G065300 0.5kb upstream 0.5kb upstream 500 false Chr01: 4942952-4943451 Sorghum bicolor
Sobic.001G065300 0.5kb downstream 0.5kb downstream 7882 true Chr01: 4943452-4951333 Sorghum bicolor
Sobic.001G065300 0.5kb downstream 0.5kb downstream 500 false Chr01: 4950834-4951333 Sorghum bicolor
Sobic.001G065300 1.0kb upstream 1.0kb upstream 8382 true Chr01: 4942452-4950833 Sorghum bicolor
Sobic.001G065300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4942452-4943451 Sorghum bicolor
Sobic.001G065300 1.0kb downstream 1.0kb downstream 8382 true Chr01: 4943452-4951833 Sorghum bicolor
Sobic.001G065300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4950834-4951833 Sorghum bicolor
Sobic.001G065300 2.0kb upstream 2.0kb upstream 9382 true Chr01: 4941452-4950833 Sorghum bicolor
Sobic.001G065300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4941452-4943451 Sorghum bicolor
Sobic.001G065300 2.0kb downstream 2.0kb downstream 9382 true Chr01: 4943452-4952833 Sorghum bicolor
Sobic.001G065300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4950834-4952833 Sorghum bicolor
Sobic.001G065300 5.0kb upstream 5.0kb upstream 12382 true Chr01: 4938452-4950833 Sorghum bicolor
Sobic.001G065300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4938452-4943451 Sorghum bicolor
Sobic.001G065300 5.0kb downstream 5.0kb downstream 12382 true Chr01: 4943452-4955833 Sorghum bicolor
Sobic.001G065300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4950834-4955833 Sorghum bicolor
Sobic.001G065300 10.0kb upstream 10.0kb upstream 17382 true Chr01: 4933452-4950833 Sorghum bicolor
Sobic.001G065300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4933452-4943451 Sorghum bicolor
Sobic.001G065300 10.0kb downstream 10.0kb downstream 17382 true Chr01: 4943452-4960833 Sorghum bicolor
Sobic.001G065300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4950834-4960833 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026221 5273 Angiosperm View MSA
122194996 5267 Panicoideae View MSA
124573840 5269 Grass View MSA
121296231 5274 Embryophyte View MSA
123425674 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.52       High
cufflinks 0.007     Low Low
cufflinks 0.07        
cufflinks 0.076        
cufflinks 0.182        
cufflinks 0.275       High
cufflinks 0.129        
cufflinks 0.041     Low  
cufflinks 0.213        
cufflinks 0.157        
cufflinks 0.052     Low  
cufflinks 0.087     Low  
cufflinks 0.109        
cufflinks 0.087     Low  
cufflinks 0.108        
cufflinks 0.012     Low Low
cufflinks 0.106        
cufflinks 0.118        
cufflinks 0.059     Low  
cufflinks 0.102     Low  
cufflinks 0.681       High
cufflinks 0.092     Low  
cufflinks 0.072     Low  
cufflinks 0.102        
cufflinks 0.011     Low Low
cufflinks 0.006     Low Low
cufflinks 0.068     Low  
cufflinks 0.887       High
cufflinks 0.044     Low  
cufflinks 0.14        

0 Strain