Gene : Sobic.003G361100 S. bicolor v3.1.1
Defline:  (1 of 1) PF07014//PF07231 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) // Hs1pro-1 N-terminus (Hs1pro-1_N) Genomic Order:  3794
Name:  ? Sobic.003G361100 Secondary Identifier:  ? PAC:37917812
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G361100 0.5kb upstream 0.5kb upstream 3408 true Chr03: 67868018-67871425 Sorghum bicolor
Sobic.003G361100 0.5kb upstream 0.5kb upstream 500 false Chr03: 67870926-67871425 Sorghum bicolor
Sobic.003G361100 0.5kb downstream 0.5kb downstream 3408 true Chr03: 67867518-67870925 Sorghum bicolor
Sobic.003G361100 0.5kb downstream 0.5kb downstream 500 false Chr03: 67867518-67868017 Sorghum bicolor
Sobic.003G361100 1.0kb upstream 1.0kb upstream 3908 true Chr03: 67868018-67871925 Sorghum bicolor
Sobic.003G361100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 67870926-67871925 Sorghum bicolor
Sobic.003G361100 1.0kb downstream 1.0kb downstream 3908 true Chr03: 67867018-67870925 Sorghum bicolor
Sobic.003G361100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 67867018-67868017 Sorghum bicolor
Sobic.003G361100 2.0kb upstream 2.0kb upstream 4908 true Chr03: 67868018-67872925 Sorghum bicolor
Sobic.003G361100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 67870926-67872925 Sorghum bicolor
Sobic.003G361100 2.0kb downstream 2.0kb downstream 4908 true Chr03: 67866018-67870925 Sorghum bicolor
Sobic.003G361100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 67866018-67868017 Sorghum bicolor
Sobic.003G361100 5.0kb upstream 5.0kb upstream 7908 true Chr03: 67868018-67875925 Sorghum bicolor
Sobic.003G361100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 67870926-67875925 Sorghum bicolor
Sobic.003G361100 5.0kb downstream 5.0kb downstream 7908 true Chr03: 67863018-67870925 Sorghum bicolor
Sobic.003G361100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 67863018-67868017 Sorghum bicolor
Sobic.003G361100 10.0kb upstream 10.0kb upstream 12908 true Chr03: 67868018-67880925 Sorghum bicolor
Sobic.003G361100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 67870926-67880925 Sorghum bicolor
Sobic.003G361100 10.0kb downstream 10.0kb downstream 12908 true Chr03: 67858018-67870925 Sorghum bicolor
Sobic.003G361100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 67858018-67868017 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180548 5267 Panicoideae View MSA
124579616 5269 Grass View MSA
122043569 5273 Angiosperm View MSA
121344481 5274 Embryophyte View MSA
123380055 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.295        
cufflinks 0.444       Low
cufflinks 10.457     High  
cufflinks 13.142     High  
cufflinks 69.245     High High
cufflinks 77.747     High High
cufflinks 0.505       Low
cufflinks 1.182        
cufflinks 21.157     High  
cufflinks 9.662        
cufflinks 20.865     High  
cufflinks 0.859       Low
cufflinks 18.603     High  
cufflinks 1.274        
cufflinks 20.341     High  
cufflinks 2.397        
cufflinks 0.379       Low
cufflinks 0.404       Low
cufflinks 19.836     High  
cufflinks 0.468       Low
cufflinks 2.681        
cufflinks 5.981        
cufflinks 0.804       Low
cufflinks 0.562       Low
cufflinks 0.772       Low
cufflinks 0.884       Low
cufflinks 32.417     High High
cufflinks 3.409        
cufflinks 1.133        
cufflinks 8.97        

0 Strain