Gene : Sobic.001G057600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11772//PTHR11772:SF20 - ASPARAGINE SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  578
Name:  ? Sobic.001G057600 Secondary Identifier:  ? PAC:37941688
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G057600 0.5kb upstream 0.5kb upstream 3308 true Chr01: 4362628-4365935 Sorghum bicolor
Sobic.001G057600 0.5kb upstream 0.5kb upstream 500 false Chr01: 4365436-4365935 Sorghum bicolor
Sobic.001G057600 0.5kb downstream 0.5kb downstream 3308 true Chr01: 4362128-4365435 Sorghum bicolor
Sobic.001G057600 0.5kb downstream 0.5kb downstream 500 false Chr01: 4362128-4362627 Sorghum bicolor
Sobic.001G057600 1.0kb upstream 1.0kb upstream 3808 true Chr01: 4362628-4366435 Sorghum bicolor
Sobic.001G057600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4365436-4366435 Sorghum bicolor
Sobic.001G057600 1.0kb downstream 1.0kb downstream 3808 true Chr01: 4361628-4365435 Sorghum bicolor
Sobic.001G057600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4361628-4362627 Sorghum bicolor
Sobic.001G057600 2.0kb upstream 2.0kb upstream 4808 true Chr01: 4362628-4367435 Sorghum bicolor
Sobic.001G057600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4365436-4367435 Sorghum bicolor
Sobic.001G057600 2.0kb downstream 2.0kb downstream 4808 true Chr01: 4360628-4365435 Sorghum bicolor
Sobic.001G057600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4360628-4362627 Sorghum bicolor
Sobic.001G057600 5.0kb upstream 5.0kb upstream 7808 true Chr01: 4362628-4370435 Sorghum bicolor
Sobic.001G057600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4365436-4370435 Sorghum bicolor
Sobic.001G057600 5.0kb downstream 5.0kb downstream 7808 true Chr01: 4357628-4365435 Sorghum bicolor
Sobic.001G057600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4357628-4362627 Sorghum bicolor
Sobic.001G057600 10.0kb upstream 10.0kb upstream 12808 true Chr01: 4362628-4375435 Sorghum bicolor
Sobic.001G057600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4365436-4375435 Sorghum bicolor
Sobic.001G057600 10.0kb downstream 10.0kb downstream 12808 true Chr01: 4352628-4365435 Sorghum bicolor
Sobic.001G057600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4352628-4362627 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181463 5267 Panicoideae View MSA
124570979 5269 Grass View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.299        
cufflinks 0.345        
cufflinks 0.784        
cufflinks 0.973        
cufflinks 0.252        
cufflinks 1.583        
cufflinks 0.233       Low
cufflinks 0.406        
cufflinks 1.813        
cufflinks 1.474        
cufflinks 0.824        
cufflinks 0.717        
cufflinks 1.185        
cufflinks 1.493        
cufflinks 3.56       High
cufflinks 3.589       High
cufflinks 0.123       Low
cufflinks 0.213       Low
cufflinks 1.46        
cufflinks 0.313        
cufflinks 0.617        
cufflinks 1.115        
cufflinks 0.558        
cufflinks 0.384        
cufflinks 1.004        
cufflinks 0.616        
cufflinks 1.227        
cufflinks 23.662     High High
cufflinks 0.143       Low
cufflinks 1.743        

0 Strain