Gene : Sobic.001G061200 S. bicolor v3.1.1
Defline:  (1 of 2) K08517 - vesicle transport protein SEC22 (SEC22) Genomic Order:  616
Name:  ? Sobic.001G061200 Secondary Identifier:  ? PAC:37940107
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G061200 0.5kb upstream 0.5kb upstream 3968 true Chr01: 4542007-4545974 Sorghum bicolor
Sobic.001G061200 0.5kb upstream 0.5kb upstream 500 false Chr01: 4545475-4545974 Sorghum bicolor
Sobic.001G061200 0.5kb downstream 0.5kb downstream 3968 true Chr01: 4541507-4545474 Sorghum bicolor
Sobic.001G061200 0.5kb downstream 0.5kb downstream 500 false Chr01: 4541507-4542006 Sorghum bicolor
Sobic.001G061200 1.0kb upstream 1.0kb upstream 4468 true Chr01: 4542007-4546474 Sorghum bicolor
Sobic.001G061200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4545475-4546474 Sorghum bicolor
Sobic.001G061200 1.0kb downstream 1.0kb downstream 4468 true Chr01: 4541007-4545474 Sorghum bicolor
Sobic.001G061200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4541007-4542006 Sorghum bicolor
Sobic.001G061200 2.0kb upstream 2.0kb upstream 5468 true Chr01: 4542007-4547474 Sorghum bicolor
Sobic.001G061200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4545475-4547474 Sorghum bicolor
Sobic.001G061200 2.0kb downstream 2.0kb downstream 5468 true Chr01: 4540007-4545474 Sorghum bicolor
Sobic.001G061200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4540007-4542006 Sorghum bicolor
Sobic.001G061200 5.0kb upstream 5.0kb upstream 8468 true Chr01: 4542007-4550474 Sorghum bicolor
Sobic.001G061200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4545475-4550474 Sorghum bicolor
Sobic.001G061200 5.0kb downstream 5.0kb downstream 8468 true Chr01: 4537007-4545474 Sorghum bicolor
Sobic.001G061200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4537007-4542006 Sorghum bicolor
Sobic.001G061200 10.0kb upstream 10.0kb upstream 13468 true Chr01: 4542007-4555474 Sorghum bicolor
Sobic.001G061200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4545475-4555474 Sorghum bicolor
Sobic.001G061200 10.0kb downstream 10.0kb downstream 13468 true Chr01: 4532007-4545474 Sorghum bicolor
Sobic.001G061200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4532007-4542006 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198980 5267 Panicoideae View MSA
124584489 5269 Grass View MSA
122046474 5273 Angiosperm View MSA
121346313 5274 Embryophyte View MSA
123424515 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.512     High  
cufflinks 3.568       Low
cufflinks 6.97       Low
cufflinks 9.55        
cufflinks 13.974     High  
cufflinks 17.901     High  
cufflinks 13.478     High  
cufflinks 5.25       Low
cufflinks 11.767        
cufflinks 10.669        
cufflinks 11.139        
cufflinks 14.649     High  
cufflinks 13.914     High  
cufflinks 15.05     High  
cufflinks 13.574     High  
cufflinks 7.171       Low
cufflinks 16.412     High  
cufflinks 16.04     High  
cufflinks 8.017        
cufflinks 18.823     High High
cufflinks 12.458        
cufflinks 15.615     High  
cufflinks 17.373     High  
cufflinks 16.46     High  
cufflinks 5.096       Low
cufflinks 2.981       Low
cufflinks 9.958        
cufflinks 8.294        
cufflinks 14.109     High  
cufflinks 14.419     High  

0 Strain