Gene : Sobic.001G061800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11669//PTHR11669:SF1 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // REPLICATION FACTOR C SUBUNIT 3 Genomic Order:  622
Name:  ? Sobic.001G061800 Secondary Identifier:  ? PAC:37937757
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G061800 0.5kb upstream 0.5kb upstream 5116 true Chr01: 4572359-4577474 Sorghum bicolor
Sobic.001G061800 0.5kb upstream 0.5kb upstream 500 false Chr01: 4576975-4577474 Sorghum bicolor
Sobic.001G061800 0.5kb downstream 0.5kb downstream 5116 true Chr01: 4571859-4576974 Sorghum bicolor
Sobic.001G061800 0.5kb downstream 0.5kb downstream 500 false Chr01: 4571859-4572358 Sorghum bicolor
Sobic.001G061800 1.0kb upstream 1.0kb upstream 5616 true Chr01: 4572359-4577974 Sorghum bicolor
Sobic.001G061800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4576975-4577974 Sorghum bicolor
Sobic.001G061800 1.0kb downstream 1.0kb downstream 5616 true Chr01: 4571359-4576974 Sorghum bicolor
Sobic.001G061800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4571359-4572358 Sorghum bicolor
Sobic.001G061800 2.0kb upstream 2.0kb upstream 6616 true Chr01: 4572359-4578974 Sorghum bicolor
Sobic.001G061800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4576975-4578974 Sorghum bicolor
Sobic.001G061800 2.0kb downstream 2.0kb downstream 6616 true Chr01: 4570359-4576974 Sorghum bicolor
Sobic.001G061800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4570359-4572358 Sorghum bicolor
Sobic.001G061800 5.0kb upstream 5.0kb upstream 9616 true Chr01: 4572359-4581974 Sorghum bicolor
Sobic.001G061800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4576975-4581974 Sorghum bicolor
Sobic.001G061800 5.0kb downstream 5.0kb downstream 9616 true Chr01: 4567359-4576974 Sorghum bicolor
Sobic.001G061800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4567359-4572358 Sorghum bicolor
Sobic.001G061800 10.0kb upstream 10.0kb upstream 14616 true Chr01: 4572359-4586974 Sorghum bicolor
Sobic.001G061800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4576975-4586974 Sorghum bicolor
Sobic.001G061800 10.0kb downstream 10.0kb downstream 14616 true Chr01: 4562359-4576974 Sorghum bicolor
Sobic.001G061800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4562359-4572358 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175030 5267 Panicoideae View MSA
124576425 5269 Grass View MSA
122043390 5273 Angiosperm View MSA
121345700 5274 Embryophyte View MSA
123424767 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.027     High High
cufflinks 0.319       Low
cufflinks 2.012        
cufflinks 4.743        
cufflinks 4.535        
cufflinks 3.486        
cufflinks 3.101        
cufflinks 0.473       Low
cufflinks 5.303        
cufflinks 6.564        
cufflinks 3.803        
cufflinks 4.171        
cufflinks 3.314        
cufflinks 3.294        
cufflinks 4.784        
cufflinks 1.535        
cufflinks 3.123        
cufflinks 3.508        
cufflinks 1.357        
cufflinks 3.471        
cufflinks 15.803     High High
cufflinks 4.278        
cufflinks 4.122        
cufflinks 4.37        
cufflinks 0.75       Low
cufflinks 0.25       Low
cufflinks 4.239        
cufflinks 6.048        
cufflinks 1.313        
cufflinks 6.57        

0 Strain