Gene : Sobic.001G053800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21737:SF4 - CACTIN Genomic Order:  543
Name:  ? Sobic.001G053800 Secondary Identifier:  ? PAC:37937701
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G053800 0.5kb upstream 0.5kb upstream 6641 true Chr01: 4024616-4031256 Sorghum bicolor
Sobic.001G053800 0.5kb upstream 0.5kb upstream 500 false Chr01: 4030757-4031256 Sorghum bicolor
Sobic.001G053800 0.5kb downstream 0.5kb downstream 6641 true Chr01: 4024116-4030756 Sorghum bicolor
Sobic.001G053800 0.5kb downstream 0.5kb downstream 500 false Chr01: 4024116-4024615 Sorghum bicolor
Sobic.001G053800 1.0kb upstream 1.0kb upstream 7141 true Chr01: 4024616-4031756 Sorghum bicolor
Sobic.001G053800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4030757-4031756 Sorghum bicolor
Sobic.001G053800 1.0kb downstream 1.0kb downstream 7141 true Chr01: 4023616-4030756 Sorghum bicolor
Sobic.001G053800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4023616-4024615 Sorghum bicolor
Sobic.001G053800 2.0kb upstream 2.0kb upstream 8141 true Chr01: 4024616-4032756 Sorghum bicolor
Sobic.001G053800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4030757-4032756 Sorghum bicolor
Sobic.001G053800 2.0kb downstream 2.0kb downstream 8141 true Chr01: 4022616-4030756 Sorghum bicolor
Sobic.001G053800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4022616-4024615 Sorghum bicolor
Sobic.001G053800 5.0kb upstream 5.0kb upstream 11141 true Chr01: 4024616-4035756 Sorghum bicolor
Sobic.001G053800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4030757-4035756 Sorghum bicolor
Sobic.001G053800 5.0kb downstream 5.0kb downstream 11141 true Chr01: 4019616-4030756 Sorghum bicolor
Sobic.001G053800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4019616-4024615 Sorghum bicolor
Sobic.001G053800 10.0kb upstream 10.0kb upstream 16141 true Chr01: 4024616-4040756 Sorghum bicolor
Sobic.001G053800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4030757-4040756 Sorghum bicolor
Sobic.001G053800 10.0kb downstream 10.0kb downstream 16141 true Chr01: 4014616-4030756 Sorghum bicolor
Sobic.001G053800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4014616-4024615 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187960 5267 Panicoideae View MSA
124582087 5269 Grass View MSA
122043327 5273 Angiosperm View MSA
121346365 5274 Embryophyte View MSA
123428349 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.482     High High
cufflinks 5.375       Low
cufflinks 12.263     High  
cufflinks 12.077        
cufflinks 10.51        
cufflinks 6.365       Low
cufflinks 8.047        
cufflinks 6.898       Low
cufflinks 9.327        
cufflinks 9.003        
cufflinks 10.394        
cufflinks 9.833        
cufflinks 7.894        
cufflinks 9.852        
cufflinks 10.709        
cufflinks 12.757     High  
cufflinks 8.591        
cufflinks 9.245        
cufflinks 16.7     High High
cufflinks 9.763        
cufflinks 16.198     High High
cufflinks 9.555        
cufflinks 11.513     High  
cufflinks 11.04     High  
cufflinks 7.743        
cufflinks 5.779       Low
cufflinks 9.276        
cufflinks 24.444     High High
cufflinks 6.148       Low
cufflinks 12.35     High  

0 Strain