Gene : Sobic.001G053200 S. bicolor v3.1.1
Defline:  (1 of 68) PF07762 - Protein of unknown function (DUF1618) (DUF1618) Genomic Order:  538
Name:  ? Sobic.001G053200 Secondary Identifier:  ? PAC:37940261
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G053200 0.5kb upstream 0.5kb upstream 2687 true Chr01: 3933617-3936303 Sorghum bicolor
Sobic.001G053200 0.5kb upstream 0.5kb upstream 500 false Chr01: 3935804-3936303 Sorghum bicolor
Sobic.001G053200 0.5kb downstream 0.5kb downstream 2687 true Chr01: 3933117-3935803 Sorghum bicolor
Sobic.001G053200 0.5kb downstream 0.5kb downstream 500 false Chr01: 3933117-3933616 Sorghum bicolor
Sobic.001G053200 1.0kb upstream 1.0kb upstream 3187 true Chr01: 3933617-3936803 Sorghum bicolor
Sobic.001G053200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3935804-3936803 Sorghum bicolor
Sobic.001G053200 1.0kb downstream 1.0kb downstream 3187 true Chr01: 3932617-3935803 Sorghum bicolor
Sobic.001G053200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3932617-3933616 Sorghum bicolor
Sobic.001G053200 2.0kb upstream 2.0kb upstream 4187 true Chr01: 3933617-3937803 Sorghum bicolor
Sobic.001G053200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3935804-3937803 Sorghum bicolor
Sobic.001G053200 2.0kb downstream 2.0kb downstream 4187 true Chr01: 3931617-3935803 Sorghum bicolor
Sobic.001G053200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3931617-3933616 Sorghum bicolor
Sobic.001G053200 5.0kb upstream 5.0kb upstream 7187 true Chr01: 3933617-3940803 Sorghum bicolor
Sobic.001G053200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3935804-3940803 Sorghum bicolor
Sobic.001G053200 5.0kb downstream 5.0kb downstream 7187 true Chr01: 3928617-3935803 Sorghum bicolor
Sobic.001G053200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3928617-3933616 Sorghum bicolor
Sobic.001G053200 10.0kb upstream 10.0kb upstream 12187 true Chr01: 3933617-3945803 Sorghum bicolor
Sobic.001G053200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3935804-3945803 Sorghum bicolor
Sobic.001G053200 10.0kb downstream 10.0kb downstream 12187 true Chr01: 3923617-3935803 Sorghum bicolor
Sobic.001G053200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3923617-3933616 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122193733 5267 Panicoideae View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.017     Low High
cufflinks 0.009     Low  
cufflinks 0.018     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low

0 Strain