Gene : Sobic.001G053100 S. bicolor v3.1.1
Defline:  (1 of 68) PF07762 - Protein of unknown function (DUF1618) (DUF1618) Genomic Order:  537
Name:  ? Sobic.001G053100 Secondary Identifier:  ? PAC:37939897
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G053100 0.5kb upstream 0.5kb upstream 2935 true Chr01: 3916576-3919510 Sorghum bicolor
Sobic.001G053100 0.5kb upstream 0.5kb upstream 500 false Chr01: 3919011-3919510 Sorghum bicolor
Sobic.001G053100 0.5kb downstream 0.5kb downstream 2935 true Chr01: 3916076-3919010 Sorghum bicolor
Sobic.001G053100 0.5kb downstream 0.5kb downstream 500 false Chr01: 3916076-3916575 Sorghum bicolor
Sobic.001G053100 1.0kb upstream 1.0kb upstream 3435 true Chr01: 3916576-3920010 Sorghum bicolor
Sobic.001G053100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3919011-3920010 Sorghum bicolor
Sobic.001G053100 1.0kb downstream 1.0kb downstream 3435 true Chr01: 3915576-3919010 Sorghum bicolor
Sobic.001G053100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3915576-3916575 Sorghum bicolor
Sobic.001G053100 2.0kb upstream 2.0kb upstream 4435 true Chr01: 3916576-3921010 Sorghum bicolor
Sobic.001G053100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3919011-3921010 Sorghum bicolor
Sobic.001G053100 2.0kb downstream 2.0kb downstream 4435 true Chr01: 3914576-3919010 Sorghum bicolor
Sobic.001G053100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3914576-3916575 Sorghum bicolor
Sobic.001G053100 5.0kb upstream 5.0kb upstream 7435 true Chr01: 3916576-3924010 Sorghum bicolor
Sobic.001G053100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3919011-3924010 Sorghum bicolor
Sobic.001G053100 5.0kb downstream 5.0kb downstream 7435 true Chr01: 3911576-3919010 Sorghum bicolor
Sobic.001G053100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3911576-3916575 Sorghum bicolor
Sobic.001G053100 10.0kb upstream 10.0kb upstream 12435 true Chr01: 3916576-3929010 Sorghum bicolor
Sobic.001G053100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3919011-3929010 Sorghum bicolor
Sobic.001G053100 10.0kb downstream 10.0kb downstream 12435 true Chr01: 3906576-3919010 Sorghum bicolor
Sobic.001G053100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3906576-3916575 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122193733 5267 Panicoideae View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low High
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain