Gene : Sobic.001G056700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF90 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // BASIC LEUCINE ZIPPER 63 Genomic Order:  570
Name:  ? Sobic.001G056700 Secondary Identifier:  ? PAC:37942793
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G056700 0.5kb upstream 0.5kb upstream 4472 true Chr01: 4274959-4279430 Sorghum bicolor
Sobic.001G056700 0.5kb upstream 0.5kb upstream 500 false Chr01: 4274959-4275458 Sorghum bicolor
Sobic.001G056700 0.5kb downstream 0.5kb downstream 4472 true Chr01: 4275459-4279930 Sorghum bicolor
Sobic.001G056700 0.5kb downstream 0.5kb downstream 500 false Chr01: 4279431-4279930 Sorghum bicolor
Sobic.001G056700 1.0kb upstream 1.0kb upstream 4972 true Chr01: 4274459-4279430 Sorghum bicolor
Sobic.001G056700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4274459-4275458 Sorghum bicolor
Sobic.001G056700 1.0kb downstream 1.0kb downstream 4972 true Chr01: 4275459-4280430 Sorghum bicolor
Sobic.001G056700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4279431-4280430 Sorghum bicolor
Sobic.001G056700 2.0kb upstream 2.0kb upstream 5972 true Chr01: 4273459-4279430 Sorghum bicolor
Sobic.001G056700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4273459-4275458 Sorghum bicolor
Sobic.001G056700 2.0kb downstream 2.0kb downstream 5972 true Chr01: 4275459-4281430 Sorghum bicolor
Sobic.001G056700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4279431-4281430 Sorghum bicolor
Sobic.001G056700 5.0kb upstream 5.0kb upstream 8972 true Chr01: 4270459-4279430 Sorghum bicolor
Sobic.001G056700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4270459-4275458 Sorghum bicolor
Sobic.001G056700 5.0kb downstream 5.0kb downstream 8972 true Chr01: 4275459-4284430 Sorghum bicolor
Sobic.001G056700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4279431-4284430 Sorghum bicolor
Sobic.001G056700 10.0kb upstream 10.0kb upstream 13972 true Chr01: 4265459-4279430 Sorghum bicolor
Sobic.001G056700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4265459-4275458 Sorghum bicolor
Sobic.001G056700 10.0kb downstream 10.0kb downstream 13972 true Chr01: 4275459-4289430 Sorghum bicolor
Sobic.001G056700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4279431-4289430 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175031 5267 Panicoideae View MSA
124586675 5269 Grass View MSA
122051376 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350237 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.283        
cufflinks 2.566       Low
cufflinks 6.071        
cufflinks 3.486       Low
cufflinks 11.699       High
cufflinks 2.817       Low
cufflinks 6.269        
cufflinks 5.688        
cufflinks 3.564       Low
cufflinks 4.752        
cufflinks 13.892     High High
cufflinks 9.57        
cufflinks 4.72        
cufflinks 10.421        
cufflinks 6.094        
cufflinks 3.993       Low
cufflinks 6.321        
cufflinks 6.787        
cufflinks 5.273        
cufflinks 6.018        
cufflinks 8.744        
cufflinks 8.701        
cufflinks 8.896        
cufflinks 9.173        
cufflinks 4.253       Low
cufflinks 2.486       Low
cufflinks 15.316     High High
cufflinks 9.794     High  
cufflinks 5.698        
cufflinks 7.259        

0 Strain