Gene : Sobic.001G050900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10869//PTHR10869:SF65 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED Genomic Order:  516
Name:  ? Sobic.001G050900 Secondary Identifier:  ? PAC:37940791
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G050900 0.5kb upstream 0.5kb upstream 2994 true Chr01: 3739382-3742375 Sorghum bicolor
Sobic.001G050900 0.5kb upstream 0.5kb upstream 500 false Chr01: 3739382-3739881 Sorghum bicolor
Sobic.001G050900 0.5kb downstream 0.5kb downstream 2994 true Chr01: 3739882-3742875 Sorghum bicolor
Sobic.001G050900 0.5kb downstream 0.5kb downstream 500 false Chr01: 3742376-3742875 Sorghum bicolor
Sobic.001G050900 1.0kb upstream 1.0kb upstream 3494 true Chr01: 3738882-3742375 Sorghum bicolor
Sobic.001G050900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3738882-3739881 Sorghum bicolor
Sobic.001G050900 1.0kb downstream 1.0kb downstream 3494 true Chr01: 3739882-3743375 Sorghum bicolor
Sobic.001G050900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3742376-3743375 Sorghum bicolor
Sobic.001G050900 2.0kb upstream 2.0kb upstream 4494 true Chr01: 3737882-3742375 Sorghum bicolor
Sobic.001G050900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3737882-3739881 Sorghum bicolor
Sobic.001G050900 2.0kb downstream 2.0kb downstream 4494 true Chr01: 3739882-3744375 Sorghum bicolor
Sobic.001G050900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3742376-3744375 Sorghum bicolor
Sobic.001G050900 5.0kb upstream 5.0kb upstream 7494 true Chr01: 3734882-3742375 Sorghum bicolor
Sobic.001G050900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3734882-3739881 Sorghum bicolor
Sobic.001G050900 5.0kb downstream 5.0kb downstream 7494 true Chr01: 3739882-3747375 Sorghum bicolor
Sobic.001G050900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3742376-3747375 Sorghum bicolor
Sobic.001G050900 10.0kb upstream 10.0kb upstream 12494 true Chr01: 3729882-3742375 Sorghum bicolor
Sobic.001G050900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3729882-3739881 Sorghum bicolor
Sobic.001G050900 10.0kb downstream 10.0kb downstream 12494 true Chr01: 3739882-3752375 Sorghum bicolor
Sobic.001G050900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3742376-3752375 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176250 5267 Panicoideae View MSA
124568787 5269 Grass View MSA
122045302 5273 Angiosperm View MSA
121349816 5274 Embryophyte View MSA
123428732 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.507     High High
cufflinks 0.073        
cufflinks 0.117        
cufflinks 0.39        
cufflinks 0.379        
cufflinks 0.188        
cufflinks 0.054     Low Low
cufflinks 0.07        
cufflinks 0.521        
cufflinks 1.045       High
cufflinks 0.127        
cufflinks 0.283        
cufflinks 0.459        
cufflinks 3.662       High
cufflinks 0.408        
cufflinks 0.187        
cufflinks 0.041     Low Low
cufflinks 0.082     Low  
cufflinks 0.107        
cufflinks 0.09     Low  
cufflinks 0.336        
cufflinks 0.212        
cufflinks 0.069     Low  
cufflinks 0.08     Low  
cufflinks 0.028     Low Low
cufflinks 0.034     Low Low
cufflinks 1.151       High
cufflinks 0.46        
cufflinks 0.09        
cufflinks 2.458       High

0 Strain