Gene : Sobic.001G047100 S. bicolor v3.1.1
Defline:  (1 of 1) K18342 - OTU domain-containing protein 6 [EC:3.4.19.12] (OTUD6) Genomic Order:  478
Name:  ? Sobic.001G047100 Secondary Identifier:  ? PAC:37938024
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G047100 0.5kb upstream 0.5kb upstream 5242 true Chr01: 3467042-3472283 Sorghum bicolor
Sobic.001G047100 0.5kb upstream 0.5kb upstream 500 false Chr01: 3467042-3467541 Sorghum bicolor
Sobic.001G047100 0.5kb downstream 0.5kb downstream 5242 true Chr01: 3467542-3472783 Sorghum bicolor
Sobic.001G047100 0.5kb downstream 0.5kb downstream 500 false Chr01: 3472284-3472783 Sorghum bicolor
Sobic.001G047100 1.0kb upstream 1.0kb upstream 5742 true Chr01: 3466542-3472283 Sorghum bicolor
Sobic.001G047100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3466542-3467541 Sorghum bicolor
Sobic.001G047100 1.0kb downstream 1.0kb downstream 5742 true Chr01: 3467542-3473283 Sorghum bicolor
Sobic.001G047100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3472284-3473283 Sorghum bicolor
Sobic.001G047100 2.0kb upstream 2.0kb upstream 6742 true Chr01: 3465542-3472283 Sorghum bicolor
Sobic.001G047100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3465542-3467541 Sorghum bicolor
Sobic.001G047100 2.0kb downstream 2.0kb downstream 6742 true Chr01: 3467542-3474283 Sorghum bicolor
Sobic.001G047100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3472284-3474283 Sorghum bicolor
Sobic.001G047100 5.0kb upstream 5.0kb upstream 9742 true Chr01: 3462542-3472283 Sorghum bicolor
Sobic.001G047100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3462542-3467541 Sorghum bicolor
Sobic.001G047100 5.0kb downstream 5.0kb downstream 9742 true Chr01: 3467542-3477283 Sorghum bicolor
Sobic.001G047100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3472284-3477283 Sorghum bicolor
Sobic.001G047100 10.0kb upstream 10.0kb upstream 14742 true Chr01: 3457542-3472283 Sorghum bicolor
Sobic.001G047100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3457542-3467541 Sorghum bicolor
Sobic.001G047100 10.0kb downstream 10.0kb downstream 14742 true Chr01: 3467542-3482283 Sorghum bicolor
Sobic.001G047100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3472284-3482283 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187489 5267 Panicoideae View MSA
124570226 5269 Grass View MSA
122043014 5273 Angiosperm View MSA
121346407 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.835     High High
cufflinks 1.77       Low
cufflinks 4.44        
cufflinks 6.502        
cufflinks 7.679        
cufflinks 5.756        
cufflinks 7.14        
cufflinks 3.136       Low
cufflinks 7.929        
cufflinks 7.818        
cufflinks 5.977        
cufflinks 6.977        
cufflinks 7.581        
cufflinks 7.587        
cufflinks 6.101        
cufflinks 3.243       Low
cufflinks 7.575        
cufflinks 7.75        
cufflinks 3.734       Low
cufflinks 8.622        
cufflinks 5.546        
cufflinks 7.182        
cufflinks 8.125        
cufflinks 7.94        
cufflinks 2.509       Low
cufflinks 1.686       Low
cufflinks 6.089        
cufflinks 11.682     High High
cufflinks 5.491        
cufflinks 6.156        

0 Strain