Gene : Sobic.001G041700 S. bicolor v3.1.1
Genomic Order:  425 Name:  ? Sobic.001G041700
Secondary Identifier:  ? PAC:37944063
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G041700 0.5kb upstream 0.5kb upstream 13058 true Chr01: 3099655-3112712 Sorghum bicolor
Sobic.001G041700 0.5kb upstream 0.5kb upstream 500 false Chr01: 3112213-3112712 Sorghum bicolor
Sobic.001G041700 0.5kb downstream 0.5kb downstream 13058 true Chr01: 3099155-3112212 Sorghum bicolor
Sobic.001G041700 0.5kb downstream 0.5kb downstream 500 false Chr01: 3099155-3099654 Sorghum bicolor
Sobic.001G041700 1.0kb upstream 1.0kb upstream 13558 true Chr01: 3099655-3113212 Sorghum bicolor
Sobic.001G041700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3112213-3113212 Sorghum bicolor
Sobic.001G041700 1.0kb downstream 1.0kb downstream 13558 true Chr01: 3098655-3112212 Sorghum bicolor
Sobic.001G041700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3098655-3099654 Sorghum bicolor
Sobic.001G041700 2.0kb upstream 2.0kb upstream 14558 true Chr01: 3099655-3114212 Sorghum bicolor
Sobic.001G041700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3112213-3114212 Sorghum bicolor
Sobic.001G041700 2.0kb downstream 2.0kb downstream 14558 true Chr01: 3097655-3112212 Sorghum bicolor
Sobic.001G041700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3097655-3099654 Sorghum bicolor
Sobic.001G041700 5.0kb upstream 5.0kb upstream 17558 true Chr01: 3099655-3117212 Sorghum bicolor
Sobic.001G041700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3112213-3117212 Sorghum bicolor
Sobic.001G041700 5.0kb downstream 5.0kb downstream 17558 true Chr01: 3094655-3112212 Sorghum bicolor
Sobic.001G041700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3094655-3099654 Sorghum bicolor
Sobic.001G041700 10.0kb upstream 10.0kb upstream 22558 true Chr01: 3099655-3122212 Sorghum bicolor
Sobic.001G041700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3112213-3122212 Sorghum bicolor
Sobic.001G041700 10.0kb downstream 10.0kb downstream 22558 true Chr01: 3089655-3112212 Sorghum bicolor
Sobic.001G041700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3089655-3099654 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195856 5267 Panicoideae View MSA
124587970 5269 Grass View MSA
122048777 5273 Angiosperm View MSA
121349208 5274 Embryophyte View MSA
123381216 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.299        
cufflinks 0.221        
cufflinks 0.157        
cufflinks 0.076       Low
cufflinks 0.566       High
cufflinks 0.21        
cufflinks 0.448        
cufflinks 0.572       High
cufflinks 0.276        
cufflinks 0.336        
cufflinks 0.166        
cufflinks 0.219        
cufflinks 0.329        
cufflinks 0.147       Low
cufflinks 0.322        
cufflinks 0.114       Low
cufflinks 0.402        
cufflinks 0.493       High
cufflinks 0.253        
cufflinks 0.351        
cufflinks 1.264       High
cufflinks 0.196        
cufflinks 0.204        
cufflinks 0.239        
cufflinks 0.134       Low
cufflinks 0.598       High
cufflinks 0.173        
cufflinks 0.151       Low
cufflinks 0.315        
cufflinks 0.447        

0 Strain