Gene : Sobic.003G369200 S. bicolor v3.1.1
Defline:  (1 of 1) K02320 - DNA polymerase alpha subunit A (POLA1) Genomic Order:  3884
Name:  ? Sobic.003G369200 Secondary Identifier:  ? PAC:37917308
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G369200 0.5kb upstream 0.5kb upstream 12134 true Chr03: 68524376-68536509 Sorghum bicolor
Sobic.003G369200 0.5kb upstream 0.5kb upstream 500 false Chr03: 68536010-68536509 Sorghum bicolor
Sobic.003G369200 0.5kb downstream 0.5kb downstream 12134 true Chr03: 68523876-68536009 Sorghum bicolor
Sobic.003G369200 0.5kb downstream 0.5kb downstream 500 false Chr03: 68523876-68524375 Sorghum bicolor
Sobic.003G369200 1.0kb upstream 1.0kb upstream 12634 true Chr03: 68524376-68537009 Sorghum bicolor
Sobic.003G369200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 68536010-68537009 Sorghum bicolor
Sobic.003G369200 1.0kb downstream 1.0kb downstream 12634 true Chr03: 68523376-68536009 Sorghum bicolor
Sobic.003G369200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 68523376-68524375 Sorghum bicolor
Sobic.003G369200 2.0kb upstream 2.0kb upstream 13634 true Chr03: 68524376-68538009 Sorghum bicolor
Sobic.003G369200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 68536010-68538009 Sorghum bicolor
Sobic.003G369200 2.0kb downstream 2.0kb downstream 13634 true Chr03: 68522376-68536009 Sorghum bicolor
Sobic.003G369200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 68522376-68524375 Sorghum bicolor
Sobic.003G369200 5.0kb upstream 5.0kb upstream 16634 true Chr03: 68524376-68541009 Sorghum bicolor
Sobic.003G369200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 68536010-68541009 Sorghum bicolor
Sobic.003G369200 5.0kb downstream 5.0kb downstream 16634 true Chr03: 68519376-68536009 Sorghum bicolor
Sobic.003G369200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 68519376-68524375 Sorghum bicolor
Sobic.003G369200 10.0kb upstream 10.0kb upstream 21634 true Chr03: 68524376-68546009 Sorghum bicolor
Sobic.003G369200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 68536010-68546009 Sorghum bicolor
Sobic.003G369200 10.0kb downstream 10.0kb downstream 21634 true Chr03: 68514376-68536009 Sorghum bicolor
Sobic.003G369200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 68514376-68524375 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194895 5267 Panicoideae View MSA
124575248 5269 Grass View MSA
122042985 5273 Angiosperm View MSA
121344859 5274 Embryophyte View MSA
123423980 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.795        
cufflinks 0.073       Low
cufflinks 0.301       Low
cufflinks 0.393       Low
cufflinks 6.461        
cufflinks 0.696        
cufflinks 4.131        
cufflinks 0.255       Low
cufflinks 1.943        
cufflinks 2.214        
cufflinks 5.551        
cufflinks 4.547        
cufflinks 0.964        
cufflinks 4.814        
cufflinks 3.216        
cufflinks 0.212       Low
cufflinks 3.691        
cufflinks 4.551        
cufflinks 0.248       Low
cufflinks 2.368        
cufflinks 13.244       High
cufflinks 5.614        
cufflinks 5.169        
cufflinks 5.922        
cufflinks 0.201       Low
cufflinks 0.084       Low
cufflinks 2.633        
cufflinks 0.557        
cufflinks 0.387       Low
cufflinks 5.814        

0 Strain