Gene : Sobic.001G035900 S. bicolor v3.1.1
Defline:  (1 of 1) K13156 - U11/U12 small nuclear ribonucleoprotein 48 kDa protein (SNRNP48) Genomic Order:  361
Name:  ? Sobic.001G035900 Secondary Identifier:  ? PAC:37943813
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G035900 0.5kb upstream 0.5kb upstream 7911 true Chr01: 2687602-2695512 Sorghum bicolor
Sobic.001G035900 0.5kb upstream 0.5kb upstream 500 false Chr01: 2695013-2695512 Sorghum bicolor
Sobic.001G035900 0.5kb downstream 0.5kb downstream 7911 true Chr01: 2687102-2695012 Sorghum bicolor
Sobic.001G035900 0.5kb downstream 0.5kb downstream 500 false Chr01: 2687102-2687601 Sorghum bicolor
Sobic.001G035900 1.0kb upstream 1.0kb upstream 8411 true Chr01: 2687602-2696012 Sorghum bicolor
Sobic.001G035900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2695013-2696012 Sorghum bicolor
Sobic.001G035900 1.0kb downstream 1.0kb downstream 8411 true Chr01: 2686602-2695012 Sorghum bicolor
Sobic.001G035900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2686602-2687601 Sorghum bicolor
Sobic.001G035900 2.0kb upstream 2.0kb upstream 9411 true Chr01: 2687602-2697012 Sorghum bicolor
Sobic.001G035900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2695013-2697012 Sorghum bicolor
Sobic.001G035900 2.0kb downstream 2.0kb downstream 9411 true Chr01: 2685602-2695012 Sorghum bicolor
Sobic.001G035900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2685602-2687601 Sorghum bicolor
Sobic.001G035900 5.0kb upstream 5.0kb upstream 12411 true Chr01: 2687602-2700012 Sorghum bicolor
Sobic.001G035900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2695013-2700012 Sorghum bicolor
Sobic.001G035900 5.0kb downstream 5.0kb downstream 12411 true Chr01: 2682602-2695012 Sorghum bicolor
Sobic.001G035900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2682602-2687601 Sorghum bicolor
Sobic.001G035900 10.0kb upstream 10.0kb upstream 17411 true Chr01: 2687602-2705012 Sorghum bicolor
Sobic.001G035900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2695013-2705012 Sorghum bicolor
Sobic.001G035900 10.0kb downstream 10.0kb downstream 17411 true Chr01: 2677602-2695012 Sorghum bicolor
Sobic.001G035900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2677602-2687601 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181986 5267 Panicoideae View MSA
124580845 5269 Grass View MSA
122044714 5273 Angiosperm View MSA
121344837 5274 Embryophyte View MSA
123380110 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.504        
cufflinks 0.436       Low
cufflinks 0.48        
cufflinks 0.661        
cufflinks 0.798        
cufflinks 0.983       High
cufflinks 0.563        
cufflinks 0.533        
cufflinks 1.027       High
cufflinks 1.011       High
cufflinks 0.446        
cufflinks 0.764        
cufflinks 0.747        
cufflinks 0.631        
cufflinks 0.669        
cufflinks 0.813        
cufflinks 0.555        
cufflinks 0.547        
cufflinks 0.752        
cufflinks 0.762        
cufflinks 1.418       High
cufflinks 0.426       Low
cufflinks 0.462        
cufflinks 0.477        
cufflinks 0.641        
cufflinks 0.54        
cufflinks 0.368       Low
cufflinks 0.464        
cufflinks 0.73        
cufflinks 0.681        

0 Strain