Gene : Sobic.001G039600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33644:SF3 - U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED Genomic Order:  402
Name:  ? Sobic.001G039600 Secondary Identifier:  ? PAC:37938289
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G039600 0.5kb upstream 0.5kb upstream 4356 true Chr01: 2951270-2955625 Sorghum bicolor
Sobic.001G039600 0.5kb upstream 0.5kb upstream 500 false Chr01: 2951270-2951769 Sorghum bicolor
Sobic.001G039600 0.5kb downstream 0.5kb downstream 4356 true Chr01: 2951770-2956125 Sorghum bicolor
Sobic.001G039600 0.5kb downstream 0.5kb downstream 500 false Chr01: 2955626-2956125 Sorghum bicolor
Sobic.001G039600 1.0kb upstream 1.0kb upstream 4856 true Chr01: 2950770-2955625 Sorghum bicolor
Sobic.001G039600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2950770-2951769 Sorghum bicolor
Sobic.001G039600 1.0kb downstream 1.0kb downstream 4856 true Chr01: 2951770-2956625 Sorghum bicolor
Sobic.001G039600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2955626-2956625 Sorghum bicolor
Sobic.001G039600 2.0kb upstream 2.0kb upstream 5856 true Chr01: 2949770-2955625 Sorghum bicolor
Sobic.001G039600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2949770-2951769 Sorghum bicolor
Sobic.001G039600 2.0kb downstream 2.0kb downstream 5856 true Chr01: 2951770-2957625 Sorghum bicolor
Sobic.001G039600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2955626-2957625 Sorghum bicolor
Sobic.001G039600 5.0kb upstream 5.0kb upstream 8856 true Chr01: 2946770-2955625 Sorghum bicolor
Sobic.001G039600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2946770-2951769 Sorghum bicolor
Sobic.001G039600 5.0kb downstream 5.0kb downstream 8856 true Chr01: 2951770-2960625 Sorghum bicolor
Sobic.001G039600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2955626-2960625 Sorghum bicolor
Sobic.001G039600 10.0kb upstream 10.0kb upstream 13856 true Chr01: 2941770-2955625 Sorghum bicolor
Sobic.001G039600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2941770-2951769 Sorghum bicolor
Sobic.001G039600 10.0kb downstream 10.0kb downstream 13856 true Chr01: 2951770-2965625 Sorghum bicolor
Sobic.001G039600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2955626-2965625 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181289 5267 Panicoideae View MSA
124574268 5269 Grass View MSA
122045751 5273 Angiosperm View MSA
121348831 5274 Embryophyte View MSA
123381033 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.162       Low
cufflinks 3.274       Low
cufflinks 5.353        
cufflinks 8.771       High
cufflinks 8.106        
cufflinks 13.95     High High
cufflinks 4.441        
cufflinks 5.243        
cufflinks 8.942       High
cufflinks 7.876        
cufflinks 4.378        
cufflinks 5.502        
cufflinks 9.162       High
cufflinks 4.62        
cufflinks 5.338        
cufflinks 5.52        
cufflinks 3.832        
cufflinks 4.025        
cufflinks 4.648        
cufflinks 5.322        
cufflinks 10.339       High
cufflinks 3.666       Low
cufflinks 3.868        
cufflinks 3.951        
cufflinks 5.359        
cufflinks 3.731       Low
cufflinks 6.004        
cufflinks 6.113        
cufflinks 4.54        
cufflinks 4.375        

0 Strain