Gene : Sobic.001G038100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  386
Name:  ? Sobic.001G038100 Secondary Identifier:  ? PAC:37941294
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G038100 0.5kb upstream 0.5kb upstream 4917 true Chr01: 2830310-2835226 Sorghum bicolor
Sobic.001G038100 0.5kb upstream 0.5kb upstream 500 false Chr01: 2834727-2835226 Sorghum bicolor
Sobic.001G038100 0.5kb downstream 0.5kb downstream 4917 true Chr01: 2829810-2834726 Sorghum bicolor
Sobic.001G038100 0.5kb downstream 0.5kb downstream 500 false Chr01: 2829810-2830309 Sorghum bicolor
Sobic.001G038100 1.0kb upstream 1.0kb upstream 5417 true Chr01: 2830310-2835726 Sorghum bicolor
Sobic.001G038100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2834727-2835726 Sorghum bicolor
Sobic.001G038100 1.0kb downstream 1.0kb downstream 5417 true Chr01: 2829310-2834726 Sorghum bicolor
Sobic.001G038100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2829310-2830309 Sorghum bicolor
Sobic.001G038100 2.0kb upstream 2.0kb upstream 6417 true Chr01: 2830310-2836726 Sorghum bicolor
Sobic.001G038100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2834727-2836726 Sorghum bicolor
Sobic.001G038100 2.0kb downstream 2.0kb downstream 6417 true Chr01: 2828310-2834726 Sorghum bicolor
Sobic.001G038100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2828310-2830309 Sorghum bicolor
Sobic.001G038100 5.0kb upstream 5.0kb upstream 9417 true Chr01: 2830310-2839726 Sorghum bicolor
Sobic.001G038100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2834727-2839726 Sorghum bicolor
Sobic.001G038100 5.0kb downstream 5.0kb downstream 9417 true Chr01: 2825310-2834726 Sorghum bicolor
Sobic.001G038100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2825310-2830309 Sorghum bicolor
Sobic.001G038100 10.0kb upstream 10.0kb upstream 14417 true Chr01: 2830310-2844726 Sorghum bicolor
Sobic.001G038100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2834727-2844726 Sorghum bicolor
Sobic.001G038100 10.0kb downstream 10.0kb downstream 14417 true Chr01: 2820310-2834726 Sorghum bicolor
Sobic.001G038100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2820310-2830309 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
122197993 5267 Panicoideae View MSA
124573041 5269 Grass View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.103       High
cufflinks 2.144       Low
cufflinks 1.799       Low
cufflinks 2.393        
cufflinks 3.328        
cufflinks 5.685       High
cufflinks 3.019        
cufflinks 2.252       Low
cufflinks 3.298        
cufflinks 2.792        
cufflinks 3.124        
cufflinks 4.364        
cufflinks 2.818        
cufflinks 3.861        
cufflinks 2.838        
cufflinks 2.922        
cufflinks 3.27        
cufflinks 3.524        
cufflinks 4.188        
cufflinks 3.65        
cufflinks 4.671       High
cufflinks 3.666        
cufflinks 3.655        
cufflinks 3.341        
cufflinks 2.304       Low
cufflinks 1.951       Low
cufflinks 2.788        
cufflinks 9.164       High
cufflinks 2.927        
cufflinks 2.807        

0 Strain