Gene : Sobic.001G038000 S. bicolor v3.1.1
Defline:  (1 of 1) 3.1.3.62 - Multiple inositol-polyphosphate phosphatase / MIPP Genomic Order:  384
Name:  ? Sobic.001G038000 Secondary Identifier:  ? PAC:37944795
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-4781 Sorghum bicolor pathologic  
Sbicolor PWY-6358 Sorghum bicolor pathologic  
Sbicolor PWY-6364 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G038000 0.5kb upstream 0.5kb upstream 5786 true Chr01: 2822265-2828050 Sorghum bicolor
Sobic.001G038000 0.5kb upstream 0.5kb upstream 500 false Chr01: 2827551-2828050 Sorghum bicolor
Sobic.001G038000 0.5kb downstream 0.5kb downstream 5786 true Chr01: 2821765-2827550 Sorghum bicolor
Sobic.001G038000 0.5kb downstream 0.5kb downstream 500 false Chr01: 2821765-2822264 Sorghum bicolor
Sobic.001G038000 1.0kb upstream 1.0kb upstream 6286 true Chr01: 2822265-2828550 Sorghum bicolor
Sobic.001G038000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2827551-2828550 Sorghum bicolor
Sobic.001G038000 1.0kb downstream 1.0kb downstream 6286 true Chr01: 2821265-2827550 Sorghum bicolor
Sobic.001G038000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2821265-2822264 Sorghum bicolor
Sobic.001G038000 2.0kb upstream 2.0kb upstream 7286 true Chr01: 2822265-2829550 Sorghum bicolor
Sobic.001G038000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2827551-2829550 Sorghum bicolor
Sobic.001G038000 2.0kb downstream 2.0kb downstream 7286 true Chr01: 2820265-2827550 Sorghum bicolor
Sobic.001G038000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2820265-2822264 Sorghum bicolor
Sobic.001G038000 5.0kb upstream 5.0kb upstream 10286 true Chr01: 2822265-2832550 Sorghum bicolor
Sobic.001G038000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2827551-2832550 Sorghum bicolor
Sobic.001G038000 5.0kb downstream 5.0kb downstream 10286 true Chr01: 2817265-2827550 Sorghum bicolor
Sobic.001G038000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2817265-2822264 Sorghum bicolor
Sobic.001G038000 10.0kb upstream 10.0kb upstream 15286 true Chr01: 2822265-2837550 Sorghum bicolor
Sobic.001G038000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2827551-2837550 Sorghum bicolor
Sobic.001G038000 10.0kb downstream 10.0kb downstream 15286 true Chr01: 2812265-2827550 Sorghum bicolor
Sobic.001G038000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2812265-2822264 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188093 5267 Panicoideae View MSA
124572260 5269 Grass View MSA
122046100 5273 Angiosperm View MSA
121344587 5274 Embryophyte View MSA
123425669 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.233       Low
cufflinks 9.392     High Low
cufflinks 37.612     High High
cufflinks 21.683     High  
cufflinks 12.042        
cufflinks 11.742        
cufflinks 14.813     High  
cufflinks 7.431       Low
cufflinks 10.633       Low
cufflinks 14.13     High  
cufflinks 19.601     High  
cufflinks 18.364     High  
cufflinks 20.684     High  
cufflinks 15.758     High  
cufflinks 19.48     High  
cufflinks 15.707     High  
cufflinks 14.429     High  
cufflinks 15.449     High  
cufflinks 16.064     High  
cufflinks 15.126     High  
cufflinks 18.996     High  
cufflinks 13.694     High  
cufflinks 19.185     High  
cufflinks 16.902     High  
cufflinks 8.661     High Low
cufflinks 6.926     High Low
cufflinks 29.792     High High
cufflinks 38.343     High High
cufflinks 10.873        
cufflinks 19.844     High  

0 Strain