Gene : Sobic.001G033200 S. bicolor v3.1.1
Defline:  (1 of 81) PF03514 - GRAS domain family (GRAS) Genomic Order:  333
Name:  ? Sobic.001G033200 Secondary Identifier:  ? PAC:37938717
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G033200 0.5kb upstream 0.5kb upstream 4567 true Chr01: 2499310-2503876 Sorghum bicolor
Sobic.001G033200 0.5kb upstream 0.5kb upstream 500 false Chr01: 2503377-2503876 Sorghum bicolor
Sobic.001G033200 0.5kb downstream 0.5kb downstream 4567 true Chr01: 2498810-2503376 Sorghum bicolor
Sobic.001G033200 0.5kb downstream 0.5kb downstream 500 false Chr01: 2498810-2499309 Sorghum bicolor
Sobic.001G033200 1.0kb upstream 1.0kb upstream 5067 true Chr01: 2499310-2504376 Sorghum bicolor
Sobic.001G033200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2503377-2504376 Sorghum bicolor
Sobic.001G033200 1.0kb downstream 1.0kb downstream 5067 true Chr01: 2498310-2503376 Sorghum bicolor
Sobic.001G033200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2498310-2499309 Sorghum bicolor
Sobic.001G033200 2.0kb upstream 2.0kb upstream 6067 true Chr01: 2499310-2505376 Sorghum bicolor
Sobic.001G033200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2503377-2505376 Sorghum bicolor
Sobic.001G033200 2.0kb downstream 2.0kb downstream 6067 true Chr01: 2497310-2503376 Sorghum bicolor
Sobic.001G033200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2497310-2499309 Sorghum bicolor
Sobic.001G033200 5.0kb upstream 5.0kb upstream 9067 true Chr01: 2499310-2508376 Sorghum bicolor
Sobic.001G033200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2503377-2508376 Sorghum bicolor
Sobic.001G033200 5.0kb downstream 5.0kb downstream 9067 true Chr01: 2494310-2503376 Sorghum bicolor
Sobic.001G033200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2494310-2499309 Sorghum bicolor
Sobic.001G033200 10.0kb upstream 10.0kb upstream 14067 true Chr01: 2499310-2513376 Sorghum bicolor
Sobic.001G033200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2503377-2513376 Sorghum bicolor
Sobic.001G033200 10.0kb downstream 10.0kb downstream 14067 true Chr01: 2489310-2503376 Sorghum bicolor
Sobic.001G033200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2489310-2499309 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032262 5273 Angiosperm View MSA
122194775 5267 Panicoideae View MSA
124575610 5269 Grass View MSA
121351918 5274 Embryophyte View MSA
123382411 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.477        
cufflinks 0.98       Low
cufflinks 5.896        
cufflinks 6.025        
cufflinks 5.402        
cufflinks 6.459        
cufflinks 2.899        
cufflinks 1.188       Low
cufflinks 8.997       High
cufflinks 8.469       High
cufflinks 5.97        
cufflinks 8.237       High
cufflinks 8.429       High
cufflinks 4.9        
cufflinks 5.505        
cufflinks 3.589        
cufflinks 2.797        
cufflinks 2.645        
cufflinks 8.353       High
cufflinks 4.005        
cufflinks 3.504        
cufflinks 4.24        
cufflinks 5.523        
cufflinks 5.745        
cufflinks 2.601        
cufflinks 0.879       Low
cufflinks 10.03       High
cufflinks 1.99       Low
cufflinks 2.052       Low
cufflinks 5.803        

0 Strain