Gene : Sobic.001G031800 S. bicolor v3.1.1
Defline:  (1 of 1) K02907 - large subunit ribosomal protein L30 (RP-L30, MRPL30, rpmD) Genomic Order:  319
Name:  ? Sobic.001G031800 Secondary Identifier:  ? PAC:37945089
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G031800 0.5kb upstream 0.5kb upstream 4143 true Chr01: 2415582-2419724 Sorghum bicolor
Sobic.001G031800 0.5kb upstream 0.5kb upstream 500 false Chr01: 2415582-2416081 Sorghum bicolor
Sobic.001G031800 0.5kb downstream 0.5kb downstream 4143 true Chr01: 2416082-2420224 Sorghum bicolor
Sobic.001G031800 0.5kb downstream 0.5kb downstream 500 false Chr01: 2419725-2420224 Sorghum bicolor
Sobic.001G031800 1.0kb upstream 1.0kb upstream 4643 true Chr01: 2415082-2419724 Sorghum bicolor
Sobic.001G031800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2415082-2416081 Sorghum bicolor
Sobic.001G031800 1.0kb downstream 1.0kb downstream 4643 true Chr01: 2416082-2420724 Sorghum bicolor
Sobic.001G031800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2419725-2420724 Sorghum bicolor
Sobic.001G031800 2.0kb upstream 2.0kb upstream 5643 true Chr01: 2414082-2419724 Sorghum bicolor
Sobic.001G031800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2414082-2416081 Sorghum bicolor
Sobic.001G031800 2.0kb downstream 2.0kb downstream 5643 true Chr01: 2416082-2421724 Sorghum bicolor
Sobic.001G031800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2419725-2421724 Sorghum bicolor
Sobic.001G031800 5.0kb upstream 5.0kb upstream 8643 true Chr01: 2411082-2419724 Sorghum bicolor
Sobic.001G031800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2411082-2416081 Sorghum bicolor
Sobic.001G031800 5.0kb downstream 5.0kb downstream 8643 true Chr01: 2416082-2424724 Sorghum bicolor
Sobic.001G031800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2419725-2424724 Sorghum bicolor
Sobic.001G031800 10.0kb upstream 10.0kb upstream 13643 true Chr01: 2406082-2419724 Sorghum bicolor
Sobic.001G031800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2406082-2416081 Sorghum bicolor
Sobic.001G031800 10.0kb downstream 10.0kb downstream 13643 true Chr01: 2416082-2429724 Sorghum bicolor
Sobic.001G031800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2419725-2429724 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176507 5267 Panicoideae View MSA
124568948 5269 Grass View MSA
122041993 5273 Angiosperm View MSA
123429056 5275 Viridiplantae View MSA
121348158 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.576       High
cufflinks 0.136       Low
cufflinks 0.249        
cufflinks 0.533        
cufflinks 0.615        
cufflinks 0.513        
cufflinks 0.445        
cufflinks 0.145       Low
cufflinks 0.347        
cufflinks 0.336        
cufflinks 0.473        
cufflinks 0.293        
cufflinks 0.219        
cufflinks 0.386        
cufflinks 0.196        
cufflinks 0.25        
cufflinks 0.44        
cufflinks 0.331        
cufflinks 0.095       Low
cufflinks 0.399        
cufflinks 0.459        
cufflinks 1.493       High
cufflinks 0.498        
cufflinks 0.402        
cufflinks 0.188        
cufflinks 0.051       Low
cufflinks 0.254        
cufflinks 1.399       High
cufflinks 0.255        
cufflinks 0.549        

0 Strain