Gene : Sobic.001G029100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  293
Name:  ? Sobic.001G029100 Secondary Identifier:  ? PAC:37939570
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G029100 0.5kb upstream 0.5kb upstream 3099 true Chr01: 2265712-2268810 Sorghum bicolor
Sobic.001G029100 0.5kb upstream 0.5kb upstream 500 false Chr01: 2268311-2268810 Sorghum bicolor
Sobic.001G029100 0.5kb downstream 0.5kb downstream 3099 true Chr01: 2265212-2268310 Sorghum bicolor
Sobic.001G029100 0.5kb downstream 0.5kb downstream 500 false Chr01: 2265212-2265711 Sorghum bicolor
Sobic.001G029100 1.0kb upstream 1.0kb upstream 3599 true Chr01: 2265712-2269310 Sorghum bicolor
Sobic.001G029100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2268311-2269310 Sorghum bicolor
Sobic.001G029100 1.0kb downstream 1.0kb downstream 3599 true Chr01: 2264712-2268310 Sorghum bicolor
Sobic.001G029100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2264712-2265711 Sorghum bicolor
Sobic.001G029100 2.0kb upstream 2.0kb upstream 4599 true Chr01: 2265712-2270310 Sorghum bicolor
Sobic.001G029100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2268311-2270310 Sorghum bicolor
Sobic.001G029100 2.0kb downstream 2.0kb downstream 4599 true Chr01: 2263712-2268310 Sorghum bicolor
Sobic.001G029100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2263712-2265711 Sorghum bicolor
Sobic.001G029100 5.0kb upstream 5.0kb upstream 7599 true Chr01: 2265712-2273310 Sorghum bicolor
Sobic.001G029100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2268311-2273310 Sorghum bicolor
Sobic.001G029100 5.0kb downstream 5.0kb downstream 7599 true Chr01: 2260712-2268310 Sorghum bicolor
Sobic.001G029100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2260712-2265711 Sorghum bicolor
Sobic.001G029100 10.0kb upstream 10.0kb upstream 12599 true Chr01: 2265712-2278310 Sorghum bicolor
Sobic.001G029100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2268311-2278310 Sorghum bicolor
Sobic.001G029100 10.0kb downstream 10.0kb downstream 12599 true Chr01: 2255712-2268310 Sorghum bicolor
Sobic.001G029100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2255712-2265711 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181587 5267 Panicoideae View MSA
124577869 5269 Grass View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.205       High
cufflinks 0.478        
cufflinks 0.634        
cufflinks 0.025     Low  
cufflinks 0.614        
cufflinks 0.687        
cufflinks 1.372       High
cufflinks 0.026     Low  
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.191        
cufflinks 0.908        
cufflinks 0.52        
cufflinks 0.803        
cufflinks 1.234       High
cufflinks 0.451        
cufflinks 0.008     Low Low
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.937       High
cufflinks 0.799        
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.45       High
cufflinks 0.195        

0 Strain