Gene : Sobic.001G028600 S. bicolor v3.1.1
Defline:  Predicted protein Genomic Order:  288
Name:  ? Sobic.001G028600 Secondary Identifier:  ? PAC:37942669
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G028600 0.5kb upstream 0.5kb upstream 2401 true Chr01: 2246554-2248954 Sorghum bicolor
Sobic.001G028600 0.5kb upstream 0.5kb upstream 500 false Chr01: 2246554-2247053 Sorghum bicolor
Sobic.001G028600 0.5kb downstream 0.5kb downstream 2401 true Chr01: 2247054-2249454 Sorghum bicolor
Sobic.001G028600 0.5kb downstream 0.5kb downstream 500 false Chr01: 2248955-2249454 Sorghum bicolor
Sobic.001G028600 1.0kb upstream 1.0kb upstream 2901 true Chr01: 2246054-2248954 Sorghum bicolor
Sobic.001G028600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2246054-2247053 Sorghum bicolor
Sobic.001G028600 1.0kb downstream 1.0kb downstream 2901 true Chr01: 2247054-2249954 Sorghum bicolor
Sobic.001G028600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2248955-2249954 Sorghum bicolor
Sobic.001G028600 2.0kb upstream 2.0kb upstream 3901 true Chr01: 2245054-2248954 Sorghum bicolor
Sobic.001G028600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2245054-2247053 Sorghum bicolor
Sobic.001G028600 2.0kb downstream 2.0kb downstream 3901 true Chr01: 2247054-2250954 Sorghum bicolor
Sobic.001G028600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2248955-2250954 Sorghum bicolor
Sobic.001G028600 5.0kb upstream 5.0kb upstream 6901 true Chr01: 2242054-2248954 Sorghum bicolor
Sobic.001G028600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2242054-2247053 Sorghum bicolor
Sobic.001G028600 5.0kb downstream 5.0kb downstream 6901 true Chr01: 2247054-2253954 Sorghum bicolor
Sobic.001G028600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2248955-2253954 Sorghum bicolor
Sobic.001G028600 10.0kb upstream 10.0kb upstream 11901 true Chr01: 2237054-2248954 Sorghum bicolor
Sobic.001G028600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2237054-2247053 Sorghum bicolor
Sobic.001G028600 10.0kb downstream 10.0kb downstream 11901 true Chr01: 2247054-2258954 Sorghum bicolor
Sobic.001G028600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2248955-2258954 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194643 5267 Panicoideae View MSA
124587108 5269 Grass View MSA
122047280 5273 Angiosperm View MSA
121349070 5274 Embryophyte View MSA
123381150 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.376        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.243        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.232        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 123.23     High High
cufflinks 0.079     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain