Gene : Sobic.003G374100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23421//PTHR23421:SF67 - BETA-GALACTOSIDASE RELATED // BETA-GALACTOSIDASE 10 Genomic Order:  3935
Name:  ? Sobic.003G374100 Secondary Identifier:  ? PAC:37918490
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G374100 0.5kb upstream 0.5kb upstream 11018 true Chr03: 68919563-68930580 Sorghum bicolor
Sobic.003G374100 0.5kb upstream 0.5kb upstream 500 false Chr03: 68919563-68920062 Sorghum bicolor
Sobic.003G374100 0.5kb downstream 0.5kb downstream 11018 true Chr03: 68920063-68931080 Sorghum bicolor
Sobic.003G374100 0.5kb downstream 0.5kb downstream 500 false Chr03: 68930581-68931080 Sorghum bicolor
Sobic.003G374100 1.0kb upstream 1.0kb upstream 11518 true Chr03: 68919063-68930580 Sorghum bicolor
Sobic.003G374100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 68919063-68920062 Sorghum bicolor
Sobic.003G374100 1.0kb downstream 1.0kb downstream 11518 true Chr03: 68920063-68931580 Sorghum bicolor
Sobic.003G374100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 68930581-68931580 Sorghum bicolor
Sobic.003G374100 2.0kb upstream 2.0kb upstream 12518 true Chr03: 68918063-68930580 Sorghum bicolor
Sobic.003G374100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 68918063-68920062 Sorghum bicolor
Sobic.003G374100 2.0kb downstream 2.0kb downstream 12518 true Chr03: 68920063-68932580 Sorghum bicolor
Sobic.003G374100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 68930581-68932580 Sorghum bicolor
Sobic.003G374100 5.0kb upstream 5.0kb upstream 15518 true Chr03: 68915063-68930580 Sorghum bicolor
Sobic.003G374100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 68915063-68920062 Sorghum bicolor
Sobic.003G374100 5.0kb downstream 5.0kb downstream 15518 true Chr03: 68920063-68935580 Sorghum bicolor
Sobic.003G374100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 68930581-68935580 Sorghum bicolor
Sobic.003G374100 10.0kb upstream 10.0kb upstream 20518 true Chr03: 68910063-68930580 Sorghum bicolor
Sobic.003G374100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 68910063-68920062 Sorghum bicolor
Sobic.003G374100 10.0kb downstream 10.0kb downstream 20518 true Chr03: 68920063-68940580 Sorghum bicolor
Sobic.003G374100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 68930581-68940580 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188348 5267 Panicoideae View MSA
124575608 5269 Grass View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.41        
cufflinks 0.023     Low Low
cufflinks 0.082       Low
cufflinks 0.04     Low Low
cufflinks 9.545       High
cufflinks 0.19        
cufflinks 2.526        
cufflinks 0.189        
cufflinks 0.106       Low
cufflinks 1.004        
cufflinks 0.122        
cufflinks 2.146        
cufflinks 1.678        
cufflinks 0.913        
cufflinks 10.49       High
cufflinks 0.082       Low
cufflinks 2.338        
cufflinks 2.513        
cufflinks 0.347        
cufflinks 1.545        
cufflinks 22.658     High High
cufflinks 1.399        
cufflinks 1.22        
cufflinks 0.777        
cufflinks 0.025     Low Low
cufflinks 0.017     Low Low
cufflinks 10.62       High
cufflinks 0.799        
cufflinks 0.533        
cufflinks 25.072     High High

0 Strain