Gene : Sobic.003G373300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  3928
Name:  ? Sobic.003G373300 Secondary Identifier:  ? PAC:37915064
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G373300 0.5kb upstream 0.5kb upstream 2627 true Chr03: 68863022-68865648 Sorghum bicolor
Sobic.003G373300 0.5kb upstream 0.5kb upstream 500 false Chr03: 68865149-68865648 Sorghum bicolor
Sobic.003G373300 0.5kb downstream 0.5kb downstream 2627 true Chr03: 68862522-68865148 Sorghum bicolor
Sobic.003G373300 0.5kb downstream 0.5kb downstream 500 false Chr03: 68862522-68863021 Sorghum bicolor
Sobic.003G373300 1.0kb upstream 1.0kb upstream 3127 true Chr03: 68863022-68866148 Sorghum bicolor
Sobic.003G373300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 68865149-68866148 Sorghum bicolor
Sobic.003G373300 1.0kb downstream 1.0kb downstream 3127 true Chr03: 68862022-68865148 Sorghum bicolor
Sobic.003G373300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 68862022-68863021 Sorghum bicolor
Sobic.003G373300 2.0kb upstream 2.0kb upstream 4127 true Chr03: 68863022-68867148 Sorghum bicolor
Sobic.003G373300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 68865149-68867148 Sorghum bicolor
Sobic.003G373300 2.0kb downstream 2.0kb downstream 4127 true Chr03: 68861022-68865148 Sorghum bicolor
Sobic.003G373300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 68861022-68863021 Sorghum bicolor
Sobic.003G373300 5.0kb upstream 5.0kb upstream 7127 true Chr03: 68863022-68870148 Sorghum bicolor
Sobic.003G373300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 68865149-68870148 Sorghum bicolor
Sobic.003G373300 5.0kb downstream 5.0kb downstream 7127 true Chr03: 68858022-68865148 Sorghum bicolor
Sobic.003G373300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 68858022-68863021 Sorghum bicolor
Sobic.003G373300 10.0kb upstream 10.0kb upstream 12127 true Chr03: 68863022-68875148 Sorghum bicolor
Sobic.003G373300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 68865149-68875148 Sorghum bicolor
Sobic.003G373300 10.0kb downstream 10.0kb downstream 12127 true Chr03: 68853022-68865148 Sorghum bicolor
Sobic.003G373300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 68853022-68863021 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041187 5273 Angiosperm View MSA
122175350 5267 Panicoideae View MSA
124572689 5269 Grass View MSA
121344159 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.944        
cufflinks 2.572        
cufflinks 4.03        
cufflinks 3.319        
cufflinks 1.783        
cufflinks 7.762       High
cufflinks 4.137        
cufflinks 4.505       High
cufflinks 3.047        
cufflinks 2.291        
cufflinks 0.74       Low
cufflinks 0.788       Low
cufflinks 1.399        
cufflinks 0.398       Low
cufflinks 2.711        
cufflinks 3.864        
cufflinks 3.457        
cufflinks 4.874       High
cufflinks 2.764        
cufflinks 1.937        
cufflinks 3.176        
cufflinks 0.757       Low
cufflinks 0.588       Low
cufflinks 0.611       Low
cufflinks 1.958        
cufflinks 1.576        
cufflinks 1.443        
cufflinks 2.193        
cufflinks 11.845     High High
cufflinks 2.705        

0 Strain