Gene : Sobic.001G160200 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Genomic Order:  1667
Name:  ? Sobic.001G160200 Secondary Identifier:  ? PAC:37943521
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G160200 0.5kb upstream 0.5kb upstream 8155 true Chr01: 13149279-13157433 Sorghum bicolor
Sobic.001G160200 0.5kb upstream 0.5kb upstream 500 false Chr01: 13149279-13149778 Sorghum bicolor
Sobic.001G160200 0.5kb downstream 0.5kb downstream 8155 true Chr01: 13149779-13157933 Sorghum bicolor
Sobic.001G160200 0.5kb downstream 0.5kb downstream 500 false Chr01: 13157434-13157933 Sorghum bicolor
Sobic.001G160200 1.0kb upstream 1.0kb upstream 8655 true Chr01: 13148779-13157433 Sorghum bicolor
Sobic.001G160200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 13148779-13149778 Sorghum bicolor
Sobic.001G160200 1.0kb downstream 1.0kb downstream 8655 true Chr01: 13149779-13158433 Sorghum bicolor
Sobic.001G160200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 13157434-13158433 Sorghum bicolor
Sobic.001G160200 2.0kb upstream 2.0kb upstream 9655 true Chr01: 13147779-13157433 Sorghum bicolor
Sobic.001G160200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 13147779-13149778 Sorghum bicolor
Sobic.001G160200 2.0kb downstream 2.0kb downstream 9655 true Chr01: 13149779-13159433 Sorghum bicolor
Sobic.001G160200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 13157434-13159433 Sorghum bicolor
Sobic.001G160200 5.0kb upstream 5.0kb upstream 12655 true Chr01: 13144779-13157433 Sorghum bicolor
Sobic.001G160200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 13144779-13149778 Sorghum bicolor
Sobic.001G160200 5.0kb downstream 5.0kb downstream 12655 true Chr01: 13149779-13162433 Sorghum bicolor
Sobic.001G160200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 13157434-13162433 Sorghum bicolor
Sobic.001G160200 10.0kb upstream 10.0kb upstream 17655 true Chr01: 13139779-13157433 Sorghum bicolor
Sobic.001G160200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 13139779-13149778 Sorghum bicolor
Sobic.001G160200 10.0kb downstream 10.0kb downstream 17655 true Chr01: 13149779-13167433 Sorghum bicolor
Sobic.001G160200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 13157434-13167433 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187544 5267 Panicoideae View MSA
124578716 5269 Grass View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.998        
cufflinks 0.61        
cufflinks 0.108       Low
cufflinks 0.25       Low
cufflinks 1.972        
cufflinks 6.257       High
cufflinks 1.394        
cufflinks 1.483        
cufflinks 12.779     High High
cufflinks 8.822       High
cufflinks 0.187       Low
cufflinks 0.265       Low
cufflinks 6.234       High
cufflinks 0.381        
cufflinks 0.96        
cufflinks 0.227       Low
cufflinks 1.07        
cufflinks 1.099        
cufflinks 1.331        
cufflinks 1.544        
cufflinks 3.291        
cufflinks 0.568        
cufflinks 0.222       Low
cufflinks 0.238       Low
cufflinks 0.372        
cufflinks 0.737        
cufflinks 0.168       Low
cufflinks 0.379        
cufflinks 1.689        
cufflinks 0.838        

0 Strain