Gene : Sobic.001G143900 S. bicolor v3.1.1
Genomic Order:  1494 Name:  ? Sobic.001G143900
Secondary Identifier:  ? PAC:37943294
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G143900 0.5kb upstream 0.5kb upstream 4679 true Chr01: 11550005-11554683 Sorghum bicolor
Sobic.001G143900 0.5kb upstream 0.5kb upstream 500 false Chr01: 11554184-11554683 Sorghum bicolor
Sobic.001G143900 0.5kb downstream 0.5kb downstream 4679 true Chr01: 11549505-11554183 Sorghum bicolor
Sobic.001G143900 0.5kb downstream 0.5kb downstream 500 false Chr01: 11549505-11550004 Sorghum bicolor
Sobic.001G143900 1.0kb upstream 1.0kb upstream 5179 true Chr01: 11550005-11555183 Sorghum bicolor
Sobic.001G143900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 11554184-11555183 Sorghum bicolor
Sobic.001G143900 1.0kb downstream 1.0kb downstream 5179 true Chr01: 11549005-11554183 Sorghum bicolor
Sobic.001G143900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 11549005-11550004 Sorghum bicolor
Sobic.001G143900 2.0kb upstream 2.0kb upstream 6179 true Chr01: 11550005-11556183 Sorghum bicolor
Sobic.001G143900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 11554184-11556183 Sorghum bicolor
Sobic.001G143900 2.0kb downstream 2.0kb downstream 6179 true Chr01: 11548005-11554183 Sorghum bicolor
Sobic.001G143900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 11548005-11550004 Sorghum bicolor
Sobic.001G143900 5.0kb upstream 5.0kb upstream 9179 true Chr01: 11550005-11559183 Sorghum bicolor
Sobic.001G143900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11554184-11559183 Sorghum bicolor
Sobic.001G143900 5.0kb downstream 5.0kb downstream 9179 true Chr01: 11545005-11554183 Sorghum bicolor
Sobic.001G143900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 11545005-11550004 Sorghum bicolor
Sobic.001G143900 10.0kb upstream 10.0kb upstream 14179 true Chr01: 11550005-11564183 Sorghum bicolor
Sobic.001G143900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 11554184-11564183 Sorghum bicolor
Sobic.001G143900 10.0kb downstream 10.0kb downstream 14179 true Chr01: 11540005-11554183 Sorghum bicolor
Sobic.001G143900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 11540005-11550004 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026471 5273 Angiosperm View MSA
122198814 5267 Panicoideae View MSA
124578271 5269 Grass View MSA
121344910 5274 Embryophyte View MSA
123380127 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.185       High
cufflinks 0.575       Low
cufflinks 1.499        
cufflinks 2.034        
cufflinks 3.348        
cufflinks 8.754       High
cufflinks 2.926        
cufflinks 1.152       Low
cufflinks 2.43        
cufflinks 2.707        
cufflinks 3.051        
cufflinks 2.434        
cufflinks 2.627        
cufflinks 2.674        
cufflinks 4.383        
cufflinks 1.135       Low
cufflinks 2.802        
cufflinks 3.414        
cufflinks 1.084       Low
cufflinks 2.789        
cufflinks 5.324       High
cufflinks 4.404        
cufflinks 3.415        
cufflinks 3.36        
cufflinks 0.446       Low
cufflinks 0.544       Low
cufflinks 2.448        
cufflinks 3.758        
cufflinks 2.812        
cufflinks 4.641        

0 Strain