Gene : Sobic.005G004800 S. bicolor v3.1.1
Defline:  (1 of 61) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Genomic Order:  49
Name:  ? Sobic.005G004800 Secondary Identifier:  ? PAC:37924154
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G004800 0.5kb upstream 0.5kb upstream 3997 true Chr05: 385972-389968 Sorghum bicolor
Sobic.005G004800 0.5kb upstream 0.5kb upstream 500 false Chr05: 385972-386471 Sorghum bicolor
Sobic.005G004800 0.5kb downstream 0.5kb downstream 3997 true Chr05: 386472-390468 Sorghum bicolor
Sobic.005G004800 0.5kb downstream 0.5kb downstream 500 false Chr05: 389969-390468 Sorghum bicolor
Sobic.005G004800 1.0kb upstream 1.0kb upstream 4497 true Chr05: 385472-389968 Sorghum bicolor
Sobic.005G004800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 385472-386471 Sorghum bicolor
Sobic.005G004800 1.0kb downstream 1.0kb downstream 4497 true Chr05: 386472-390968 Sorghum bicolor
Sobic.005G004800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 389969-390968 Sorghum bicolor
Sobic.005G004800 2.0kb upstream 2.0kb upstream 5497 true Chr05: 384472-389968 Sorghum bicolor
Sobic.005G004800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 384472-386471 Sorghum bicolor
Sobic.005G004800 2.0kb downstream 2.0kb downstream 5497 true Chr05: 386472-391968 Sorghum bicolor
Sobic.005G004800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 389969-391968 Sorghum bicolor
Sobic.005G004800 5.0kb upstream 5.0kb upstream 8497 true Chr05: 381472-389968 Sorghum bicolor
Sobic.005G004800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 381472-386471 Sorghum bicolor
Sobic.005G004800 5.0kb downstream 5.0kb downstream 8497 true Chr05: 386472-394968 Sorghum bicolor
Sobic.005G004800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 389969-394968 Sorghum bicolor
Sobic.005G004800 10.0kb upstream 10.0kb upstream 13497 true Chr05: 376472-389968 Sorghum bicolor
Sobic.005G004800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 376472-386471 Sorghum bicolor
Sobic.005G004800 10.0kb downstream 10.0kb downstream 13497 true Chr05: 386472-399968 Sorghum bicolor
Sobic.005G004800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 389969-399968 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122200416 5267 Panicoideae View MSA
124585665 5269 Grass View MSA
122045837 5273 Angiosperm View MSA
121310513 5274 Embryophyte View MSA
123347976 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low Low
cufflinks 0.795        
cufflinks 0.022     Low Low
cufflinks 0.008     Low Low
cufflinks 2.518        
cufflinks 0.188       Low
cufflinks 11.683     High  
cufflinks 8.153        
cufflinks 0.47        
cufflinks 0.292        
cufflinks 9.475        
cufflinks 7.331        
cufflinks 7.648        
cufflinks 6.815        
cufflinks 0.299        
cufflinks 1.381        
cufflinks 12.164     High  
cufflinks 12.714     High  
cufflinks 0.868        
cufflinks 15.473     High  
cufflinks 0.072     Low Low
cufflinks 6.089        
cufflinks 7.418        
cufflinks 6.987        
cufflinks 0.761        
cufflinks 2.071        
cufflinks 3.03        
cufflinks 0.019     Low Low
cufflinks 12.72     High  
cufflinks 0.278        

0 Strain