Gene : Sobic.005G005200 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR21576:SF7 - MAJOR FACILITATOR PROTEIN-RELATED Genomic Order:  53
Name:  ? Sobic.005G005200 Secondary Identifier:  ? PAC:37924571
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G005200 0.5kb upstream 0.5kb upstream 4852 true Chr05: 413848-418699 Sorghum bicolor
Sobic.005G005200 0.5kb upstream 0.5kb upstream 500 false Chr05: 413848-414347 Sorghum bicolor
Sobic.005G005200 0.5kb downstream 0.5kb downstream 4852 true Chr05: 414348-419199 Sorghum bicolor
Sobic.005G005200 0.5kb downstream 0.5kb downstream 500 false Chr05: 418700-419199 Sorghum bicolor
Sobic.005G005200 1.0kb upstream 1.0kb upstream 5352 true Chr05: 413348-418699 Sorghum bicolor
Sobic.005G005200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 413348-414347 Sorghum bicolor
Sobic.005G005200 1.0kb downstream 1.0kb downstream 5352 true Chr05: 414348-419699 Sorghum bicolor
Sobic.005G005200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 418700-419699 Sorghum bicolor
Sobic.005G005200 2.0kb upstream 2.0kb upstream 6352 true Chr05: 412348-418699 Sorghum bicolor
Sobic.005G005200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 412348-414347 Sorghum bicolor
Sobic.005G005200 2.0kb downstream 2.0kb downstream 6352 true Chr05: 414348-420699 Sorghum bicolor
Sobic.005G005200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 418700-420699 Sorghum bicolor
Sobic.005G005200 5.0kb upstream 5.0kb upstream 9352 true Chr05: 409348-418699 Sorghum bicolor
Sobic.005G005200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 409348-414347 Sorghum bicolor
Sobic.005G005200 5.0kb downstream 5.0kb downstream 9352 true Chr05: 414348-423699 Sorghum bicolor
Sobic.005G005200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 418700-423699 Sorghum bicolor
Sobic.005G005200 10.0kb upstream 10.0kb upstream 14352 true Chr05: 404348-418699 Sorghum bicolor
Sobic.005G005200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 404348-414347 Sorghum bicolor
Sobic.005G005200 10.0kb downstream 10.0kb downstream 14352 true Chr05: 414348-428699 Sorghum bicolor
Sobic.005G005200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 418700-428699 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041179 5273 Angiosperm View MSA
122191279 5267 Panicoideae View MSA
124581874 5269 Grass View MSA
123429121 5275 Viridiplantae View MSA
121309810 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.453       High
cufflinks 0.826       High
cufflinks 0.198        
cufflinks 0.44        
cufflinks 0.01     Low  
cufflinks 0.482        
cufflinks 0.219        
cufflinks 0.331        
cufflinks 0.168        
cufflinks 0.188        
cufflinks 0.007     Low Low
cufflinks 0.021     Low  
cufflinks 0.02     Low  
cufflinks 0.014     Low  
cufflinks 0.438        
cufflinks 0.652       High
cufflinks 0.468        
cufflinks 0.141        
cufflinks 0.253        
cufflinks 1.806       High
cufflinks 0.004     Low Low
cufflinks 0.004     Low Low
cufflinks 0.024     Low  
cufflinks 0.017     Low  
cufflinks 2.667       High
cufflinks 0.172        
cufflinks 0.019     Low  
cufflinks 0.188        
cufflinks 0.106        
cufflinks 0.159        

0 Strain